Pairwise Alignments

Query, 124 a.a., sigma 54 modulation protein/ribosomal protein S30EA (RefSeq) from Shewanella loihica PV-4

Subject, 113 a.a., cold shock protein associated with 30S ribosomal subunit (NCBI) from Escherichia coli BW25113

 Score = 93.2 bits (230), Expect = 1e-24
 Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 1/112 (0%)

Query: 2   IKITSKDFEVTTPIRERIESRLEKLSRHDVQLINPHVIIGQEKQGFKIEASVGIPSNTLF 61
           + ITSK  E+T  IR+ +  RL KL +    LINPH+I+ +E QGF  +A++  P+  L 
Sbjct: 3   MNITSKQMEITPAIRQHVADRLAKLEKWQTHLINPHIILSKEPQGFVADATINTPNGVLV 62

Query: 62  AQAKDKDLYAAINAMGQKLEKQLNRLSHKPEGARYTAPATSPTPESAELDDE 113
           A  K +D+Y AIN +  KLE+QLN+L HK E AR  A +        E+++E
Sbjct: 63  ASGKHEDMYTAINELINKLERQLNKLQHKGE-ARRAATSVKDANFVEEVEEE 113