Pairwise Alignments

Query, 231 a.a., DNA repair protein RecO (RefSeq) from Shewanella loihica PV-4

Subject, 227 a.a., DNA recombination and repair protein RecO from Pseudomonas fluorescens GW456-L13

 Score =  129 bits (324), Expect = 5e-35
 Identities = 90/220 (40%), Positives = 118/220 (53%), Gaps = 5/220 (2%)

Query: 5   YVLHTRPYRESSVLVNLLVDGLGRVDAVARLGSGKTSIKSILQPFQPLLFQLSGRSSLKS 64
           YVLH+R YRE+S LV+ L    GR+ AV R   GK    ++ +PF PL  +  G+  LK+
Sbjct: 10  YVLHSRAYRENSALVDFLTPQ-GRLRAVLRSARGKAG--TLARPFVPLEVEFRGKGELKN 66

Query: 65  LYQVEAASPAVPLSGNDSFAGFYLNELLVRCLSVEHGAEQFFFTYHKTLMAMAAAFS-EA 123
           + ++E+A  +  L+G   F+G YLNELL+R L  E      F  Y  TL+A+A   + E 
Sbjct: 67  VGRMESAGISTWLNGEALFSGLYLNELLIRLLPAEDPHPGVFDHYAATLLALAEGRALEP 126

Query: 124 QLRQFELSLLKELGVMPSLNLDIEGSPIETDFYYRLLSEEGFSTALGPKPNHFSG-EMLR 182
            LR FE  LL +LG   SL  DI   PI  D  YRL  + G       +P  F+G E+L 
Sbjct: 127 LLRSFEWRLLDDLGYGFSLTTDIHDQPIAPDGLYRLQVDAGLERVYLLQPGLFNGTELLA 186

Query: 183 ALEEDRLTEADFKQAKLLMRQLLSPLLGDKPLKSRALFLK 222
             E D         AK LMRQ L+  LG +PL SR LF K
Sbjct: 187 MAEADWSAPGALSAAKRLMRQALAVHLGGRPLVSRELFRK 226