Pairwise Alignments

Query, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

Subject, 378 a.a., Putrescine transport ATP-binding protein PotA (TC 3.A.1.11.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  275 bits (703), Expect = 2e-78
 Identities = 155/378 (41%), Positives = 224/378 (59%), Gaps = 8/378 (2%)

Query: 1   MASNSGVTNKPTTKTQGEVLLKIERVSKLFDDVRAVDDVSLNINRGEIFALLGGSGSGKS 60
           M  +  + N+P + +    L+ +  +SK FD    +  + L IN GE   LLG SG GK+
Sbjct: 1   MGQSKKLNNQPRSLSP---LVLLSGISKSFDGKEVISQLDLTINNGEFLTLLGPSGCGKT 57

Query: 61  TLLRMLAGFEKPTEGRIYLDGQDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQD 120
           T+LR++AG E    G I LD QDIT +P   R +N +FQSYALFPHMTV +N+AFGL+  
Sbjct: 58  TVLRLIAGLETVDAGHIMLDNQDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQ 117

Query: 121 KMPKAEIEQRVKEMLKLVHMEPYAKRKPNQLSGGQRQRVALARSLAKRPKLLLLDEPMGA 180
           K P AEI  RV + L++V +E +A+RKP+QLSGGQ+QRVA+AR++  +P+LLLLDE + A
Sbjct: 118 KTPAAEIAPRVTDALRMVQLEEFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSA 177

Query: 181 LDKKLRTQMQLEVVDILEAVGVTCVMVTHDQEEAMTMAERIAIMNDGWIAQTGSPMDIYE 240
           LD KLR QMQ E+  +   +G+T V VTHDQEEA+TM++RI +M +G I Q G+P +IYE
Sbjct: 178 LDYKLRKQMQNELKALQRKLGITFVFVTHDQEEALTMSDRIVVMRNGVIEQDGTPREIYE 237

Query: 241 SPANRMVAEFIGSVNLFEGDIVED-EVDHVVINVANIPQPFYVGYGVSTSVDTTQVWVAI 299
            P N  VA FIG +N F+  ++E  +   V  +V       YV + V       ++ V +
Sbjct: 238 EPKNLFVAGFIGEINRFDATVIERLDEQRVRASVEGRECNIYVNFAVEPG---QKLNVLL 294

Query: 300 RPEKTHISREQPEDARNWCAGKVEDIAYLGGISVYYIRLCNGQLIQ-SVMTNSDRRADSP 358
           RPE   +     ++      G V +  Y G      + L NG+++  S   N D      
Sbjct: 295 RPEDLRVEEINDDNHIEGLIGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDH 354

Query: 359 TWEEDVFVSWEATSAVVL 376
           + ++ + +SW  +  VVL
Sbjct: 355 SLDQKMAISWVESWEVVL 372