Pairwise Alignments

Query, 378 a.a., spermidine/putrescine ABC transporter ATPase subunit (RefSeq) from Shewanella loihica PV-4

Subject, 378 a.a., spermidine/putrescine ABC transporter ATPase from Escherichia coli BL21

 Score =  278 bits (712), Expect = 1e-79
 Identities = 152/359 (42%), Positives = 217/359 (60%), Gaps = 5/359 (1%)

Query: 20  LLKIERVSKLFDDVRAVDDVSLNINRGEIFALLGGSGSGKSTLLRMLAGFEKPTEGRIYL 79
           L+++  + K FD    +  + L IN GE   LLG SG GK+T+LR++AG E    GRI L
Sbjct: 17  LVQLAGIRKCFDGKEVIPQLDLTINNGEFLTLLGPSGCGKTTVLRLIAGLETVDSGRIML 76

Query: 80  DGQDITDMPPYERPINMMFQSYALFPHMTVAQNIAFGLKQDKMPKAEIEQRVKEMLKLVH 139
           D +DIT +P   R +N +FQSYALFPHMTV +N+AFGL+  K P AEI  RV E L++V 
Sbjct: 77  DNEDITHVPAENRYVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQ 136

Query: 140 MEPYAKRKPNQLSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRTQMQLEVVDILEA 199
           +E +A+RKP+QLSGGQ+QRVA+AR++  +P+LLLLDE + ALD KLR QMQ E+  +   
Sbjct: 137 LETFAQRKPHQLSGGQQQRVAIARAVVNKPRLLLLDESLSALDYKLRKQMQNELKALQRK 196

Query: 200 VGVTCVMVTHDQEEAMTMAERIAIMNDGWIAQTGSPMDIYESPANRMVAEFIGSVNLFEG 259
           +G+T V VTHDQEEA+TM++RI +M +G I Q G+P +IYE P N  VA FIG +N+F  
Sbjct: 197 LGITFVFVTHDQEEALTMSDRIVVMREGRIEQDGTPREIYEEPKNLFVAGFIGEINMFNA 256

Query: 260 DIVED-EVDHVVINVANIPQPFYVGYGVSTSVDTTQVWVAIRPEKTHISREQPEDARNWC 318
            ++E  +   V  NV       YV + V       ++ V +RPE   +     ++     
Sbjct: 257 TVIERLDEQRVRANVEGRECNIYVNFAVEPG---QKLHVLLRPEDLRVEEINDDNHAEGL 313

Query: 319 AGKVEDIAYLGGISVYYIRLCNGQLIQ-SVMTNSDRRADSPTWEEDVFVSWEATSAVVL 376
            G V +  Y G      + L NG+++  S   N D      + ++ + ++W  +  VVL
Sbjct: 314 IGYVRERNYKGMTLESVVELENGKMVMVSEFFNEDDPDFDHSLDQKMAINWVESWEVVL 372