Pairwise Alignments

Query, 399 a.a., response regulator receiver modulated diguanylate phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 778 a.a., DeoR faimly transcriptional regulator from Pseudomonas simiae WCS417

 Score =  121 bits (304), Expect = 6e-32
 Identities = 103/353 (29%), Positives = 168/353 (47%), Gaps = 24/353 (6%)

Query: 62  VDGIEFLMRLSKMEFKGGIIIASGMESRIVEAASQLVEASKLR---LLGALMKPVTTEQL 118
           + G EFL+ L   E    +  A  + + + E   Q +   +LR    +G    P   +Q+
Sbjct: 430 IAGSEFLLLLENTEVDRAVARADRLYALLTEP--QRIGNDELRHEVSMGIAAYPADGQQV 487

Query: 119 -----RVCVERYRLMAFQGNG---------VRHKGLMSIDEIRRAINSNKIIPYYQAQVD 164
                R  + R+   +  G+             + +  I ++RRA    ++   YQ ++D
Sbjct: 488 EELISRAAIARHDAASLPGHLQIYQQDRDLAHQRQITLIRDLRRAAIEGELFLCYQPKLD 547

Query: 165 IASGKIKGFEVLCRLQQGTRLQLITPDKFIDVAECNNALNSLTTKLLNNAIPEWALISQF 224
           +  G +   E L R Q  T L  ++P +FI +AE   ++ SLT  ++  AI + A  +Q 
Sbjct: 548 LKHGHVCQAEALLRWQHPT-LGQVSPVEFIPLAERTGSMRSLTLWVIEEAIRQIAEWAQR 606

Query: 225 ESCKQCHLSINLTPKQLNQSGWHTRLMQYCEQNLLSPSRLTVEITENQVLDKQRQH-STI 283
               Q  LS+N++   L       R+        +   +L  EITE+ ++    Q  S +
Sbjct: 607 GMLIQ--LSVNISVDDLADDDLAIRVTALLMTYQVEAEQLIFEITESAIMHNPLQALSVL 664

Query: 284 SQLRMNRIGVAIDDFGTGYTNLSQLCTLPISELKLDRSLVHGIHKDPVSQTILKSMQAIS 343
            QLR   I +++DDFGTGY++L+QL  LP+ ELK+D+S V  +        I++S   +S
Sbjct: 665 EQLRGCGISLSVDDFGTGYSSLAQLQRLPVQELKIDQSFVRNLDSTSGDGVIVRSTIEMS 724

Query: 344 GKLGIHLVAEGVEDIHDLNYLEQIEDISLQGYLICRPKPYSELVRWLKARERL 396
             LG+ +VAEGVE    L  L+Q    + QGYLI RP        W++ RER+
Sbjct: 725 HNLGLKVVAEGVEFAPSLKLLKQWNCDTAQGYLISRPLNAMAFEMWMR-RERV 776