Pairwise Alignments

Query, 399 a.a., response regulator receiver modulated diguanylate phosphodiesterase (RefSeq) from Shewanella loihica PV-4

Subject, 754 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  118 bits (295), Expect = 7e-31
 Identities = 74/239 (30%), Positives = 132/239 (55%), Gaps = 4/239 (1%)

Query: 149 AINSNKIIPYYQAQVDIASGKIKGFEVLCRLQQGTRLQLITPDKFIDVAECNNALNSLTT 208
           A+   + + +YQ Q+ + + +++G+E L R        L+ PD+FID+AE +  +  L  
Sbjct: 503 ALAERQFVLHYQPQMRLDTHQVQGYEALVRWDH-PEFGLLYPDRFIDLAERSGFIVELGW 561

Query: 209 KLLNNAIPEWALISQFESCKQCHLSINLTPKQLNQSGWHTRLMQYCEQNLLSPSRLTVEI 268
           ++L  A    AL S     ++  L++N++  QL Q+ +  RL+   + + ++P +L +EI
Sbjct: 562 EVLQLACE--ALSSWDAQGRKTRLAVNVSALQLRQADFADRLLSKLQHHGIAPQQLELEI 619

Query: 269 TENQVLDKQRQH-STISQLRMNRIGVAIDDFGTGYTNLSQLCTLPISELKLDRSLVHGIH 327
           TE  +LD +    + +  LR   +G+++DDFG GY   + L +LP+S+LK+DRSL+  + 
Sbjct: 620 TETTILDPEGTAVAHLHTLRGAGLGISLDDFGRGYAGFAHLHSLPLSKLKIDRSLIAALS 679

Query: 328 KDPVSQTILKSMQAISGKLGIHLVAEGVEDIHDLNYLEQIEDISLQGYLICRPKPYSEL 386
                  I+ S   ++ +LG+ +VAEGVE    + YL+       QGY   RP   ++L
Sbjct: 680 NSHDDSPIVSSTIILAKRLGLEVVAEGVETREQVVYLKLAGCDIAQGYHFSRPLSLAQL 738