Pairwise Alignments

Query, 337 a.a., transposase IS116/IS110/IS902 family protein (RefSeq) from Shewanella loihica PV-4

Subject, 408 a.a., Mobile element protein from Sphingobium sp. HT1-2

 Score =  244 bits (624), Expect = 2e-69
 Identities = 133/337 (39%), Positives = 203/337 (60%)

Query: 1   MKVTLIGIDLAKNVLQVCGVNQVGKTLFNRTVKRTQLLKTLVQYPDAVIAMEACSGSNYW 60
           M+V+++GIDL KN   V G++  G+ +  R ++R  ++         V+AMEAC G+++ 
Sbjct: 68  MEVSVLGIDLGKNSCSVVGLDGTGRVVVRRRMRRETVIAFAGSLAPCVVAMEACCGAHHM 127

Query: 61  GRELLSRGFEVKLIPPQHVKPFVKGNKNDRNDAFAICEAAMRPNIIFVKPRTLAQVDIII 120
           GR L++ G  V+L+ P++V+P+VK  KND  DA AI EAA RP + FV+ ++  Q+D+  
Sbjct: 128 GRALVAHGHTVRLMSPEYVRPYVKAQKNDDRDAEAIAEAATRPTMRFVELKSQEQLDMQT 187

Query: 121 SHRIRERRIRVRTALTNQIRGLLSEYGIVIPKGRDPLNLALPELLEDADNSLTTTARRYI 180
            HRIR++ +  RT+L NQIR LL E G ++P+GR  L + L E+LE  +  L     R +
Sbjct: 188 LHRIRDQLVGERTSLMNQIRSLLLERGHIVPQGRAKLAVRLGEMLEAEEPVLGFRIHRLV 247

Query: 181 RELLDELYAINASIKALEKEIRLQARNHEDTKRLTAIRGVAEIIATASVSFAGDGSGYQN 240
            ++     A++  I  L+ E    A   E T+RL  I G+  + ATA V+  GD   +  
Sbjct: 248 ADMRARWIALDERIADLDAEFAQAALTDERTQRLLTIPGIGALNATALVAAVGDARTFAR 307

Query: 241 GRHFSANLGLVPKEFSSGGKQKLGAITKRGNSYLRRQLIQGAWSVIRYAKNNDDRLSVWA 300
           GR  +A LGLVP++ ++GGK +L  ITKRG+ YLR+ LIQGA S +     +D RL  W 
Sbjct: 308 GRDLAAWLGLVPRQATTGGKPRLLGITKRGSRYLRKILIQGARSSLPTMSKSDTRLGAWV 367

Query: 301 RKVIERRGKQKAAVAVANKLARIIWAMLYYKTEYRPS 337
           R ++ R  +    VA+A K+ARI+WA+L +   Y P+
Sbjct: 368 RGLLSRAHQNTVVVALAAKMARIVWALLRHGRTYEPT 404