Pairwise Alignments

Query, 153 a.a., DNA polymerase III chi subunit, HolC (RefSeq) from Shewanella loihica PV-4

Subject, 146 a.a., DNA polymerase III chi subunit (EC 2.7.7.7) from Variovorax sp. SCN45

 Score = 52.8 bits (125), Expect = 2e-12
 Identities = 34/120 (28%), Positives = 56/120 (46%), Gaps = 6/120 (5%)

Query: 30  FACRLAEQAYRGQQLVYIHCNDQQQAYEVDEILWQFEPSAFVPHNLKGEGP---TGGAPV 86
           +ACRL  +A   + L  +   D +    VD  LWQ  P  FV H  +G+ P       PV
Sbjct: 16  YACRLVRKAVNARGLRVVVIGDARALDVVDAALWQLSPVDFVAH-CRGDAPPHVLARTPV 74

Query: 87  EIGFD--KLGPNKNRHLLINLADQAPQFAVNFGQIIDFVANDAAMKATARDRYRQYRELG 144
            +  D        +R +L+NL  + P     + ++ID V++++  +   R R+R Y + G
Sbjct: 75  ILSSDGADAAALPHREMLVNLGLEVPAGFERYERLIDIVSDESNDRQVGRSRWRHYADRG 134