Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 712 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  254 bits (649), Expect = 8e-72
 Identities = 144/348 (41%), Positives = 215/348 (61%), Gaps = 2/348 (0%)

Query: 225 IFSGVAMLAISVSSVFIIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVN 284
           + +G+ +L I +    I R +   V  L + A     GDLT+R+     DE   IA   N
Sbjct: 367 LIAGIGLLVIWLVGHGIARPLKQMVAMLNDIAQ--GEGDLTRRLTSDRADELGAIANGFN 424

Query: 285 RIASDFQQAVTNTHASTSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVR 344
                 Q  +T   +S  +++ ++E  A ++ +T + V  Q  +   +ATA+HE TAT +
Sbjct: 425 TFLIKLQGMITQVVSSVQKVSDSSEHTADIAIRTNQGVHKQMVEIDQVATAVHEMTATAQ 484

Query: 345 EVAQSAASAATASQDANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGT 404
           +VA++A  AA A+  A+ AA     +V ++   I ALA+E+ +A   +  LA+ S  I  
Sbjct: 485 DVARNATQAAQAASHADQAASQGMRIVRDTSTSIGALAEEIGKAVSVVQTLAKDSENINA 544

Query: 405 VVDVIQAISEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQR 464
           ++  I+ I+EQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA++TQ +TEEIQ MIQ+
Sbjct: 545 ILTAIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQKATEEIQTMIQQ 604

Query: 465 LQQGARDSMQMMQSGTEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSV 524
           LQQG RD +++M+    +   SV  +    +AL+ I  ++  IN +N QIA+A+EEQS+V
Sbjct: 605 LQQGTRDVVRVMEDSQSRTDESVQHAAKAAEALETITQAVSVINDMNTQIASAAEEQSAV 664

Query: 525 TEEININITNISEISDQTAEGARQSSDATEDLARLAESMEADIAHYKV 572
            E+IN N+ NI +++++ A GA +SS A+ DL +LAE     I  +KV
Sbjct: 665 AEDINRNVINIGQVANEVAGGADESSAASADLTKLAEQQRRLINQFKV 712