Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  242 bits (618), Expect = 2e-68
 Identities = 153/453 (33%), Positives = 262/453 (57%), Gaps = 7/453 (1%)

Query: 121 IKTLHDIIDNQILASDLADDERAEVNRLVSLLDKVTQ-EGFNPAIQALSQGEYKRSNQLL 179
           I+T   I +  I +S+    ERA  +  V LL +  Q E    ++   +Q E  RS  LL
Sbjct: 95  IRTAQGIYEKLIESSE----ERAAYDDYVRLLGQYHQIEERMKSLSRANQVEELRS--LL 148

Query: 180 LEKINPLFKDITDQAQAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSV 239
             ++    + +       LD+    A  + + +++  ++   +V     +A L   + + 
Sbjct: 149 NNELLSNSEQVNAVLTRLLDINNKMALATNKDAEDQYNMAFNMVVSLLVIATLLTLLFAW 208

Query: 240 FIIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHA 299
            + R ++L + Q  E A ++A G+LT+ I++ G DE   +   + ++    +  +     
Sbjct: 209 LLTRSITLPIAQALEAAEEVAEGNLTRPIKVDGSDEAGRLLAAMAKMQDKLRDTLQRIAG 268

Query: 300 STSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQD 359
           S ++LASAAEE   V+ ++ R +  Q  + +  ATA++E T+ V EVA++A S + AS++
Sbjct: 269 SATQLASAAEELNAVTDESARGLTQQNNEIEQAATAVNEMTSAVEEVARNAVSTSEASRN 328

Query: 360 ANGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLL 419
           A  +A   + +V E+++ IE ++ ++   +  +  LA  S +IG V+DVI+ +++QTNLL
Sbjct: 329 ATTSAGDGRDLVQETVSAIERMSGDVQATATLIGDLANESRDIGKVLDVIRGLADQTNLL 388

Query: 420 ALNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSG 479
           ALNAAIEAARAGE GRGFAVVADEVR+LA RTQ ST EI++MI  +Q G   ++  M++ 
Sbjct: 389 ALNAAIEAARAGEAGRGFAVVADEVRALAHRTQQSTSEIERMIGSIQAGTEHAVDSMRNS 448

Query: 480 TEQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEIS 539
           TE+ + +++ +     +L  I  +I EIN  N  IA+A+EEQ+ V  E++ N+ NI ++S
Sbjct: 449 TERAESTLNIAKGAGMSLDTINTAIVEINERNLVIASAAEEQAQVAREVDRNLVNIRDLS 508

Query: 540 DQTAEGARQSSDATEDLARLAESMEADIAHYKV 572
            Q+A GA Q+S A+ +L+RLA  +   +  +++
Sbjct: 509 VQSATGASQTSAASSELSRLAVDLNGMVGRFRL 541