Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 541 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  234 bits (596), Expect = 9e-66
 Identities = 153/426 (35%), Positives = 247/426 (57%), Gaps = 15/426 (3%)

Query: 145 VNRLVSLLDKVTQEGFNPAIQALSQGEYKRSNQLLLEKINPLFKDITDQAQAFLDMQIAE 204
           V ++V+L+DK  Q+    AI  L        N  L  +   L K +TD     +    + 
Sbjct: 129 VGQIVALVDKDQQQD---AIDLL--------NSRLAPQGVILNKSLTDM----ITFNQSG 173

Query: 205 AKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVFIIRRVSLSVVQLEETAVDIAAGDL 264
            +T+  ++ +T S   W+V     +A+ A  + +  + R ++  + Q    A  IA+GDL
Sbjct: 174 VQTAVDSAAQTYSSAQWIVGSIIVLALTATLLLAWLLTRSITAPLGQALIVARTIASGDL 233

Query: 265 TKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHASTSRLASAAEENAVVSTQTQRNVLD 324
           ++ I + G DE A +   +  + +  Q  +     S  +L  AAEE + V  Q+ R++  
Sbjct: 234 SQPIAVSGKDEPAQLLTALATMQAQLQGTLRGISESAQQLGCAAEEMSSVMEQSTRDLQA 293

Query: 325 QQQQTQLIATAIHEFTATVREVAQSAASAATASQDANGAAHGAQGVVDESIAVIEALAQE 384
           Q  + +  ATA+ E +A V EVA +A S+A ASQ ++  +      + E+I+ I+ L  E
Sbjct: 294 QNDEIEQAATAVTEMSAAVDEVAGNAVSSAEASQASDEDSKHGHYQISETISSIQNLVDE 353

Query: 385 LSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLALNAAIEAARAGEQGRGFAVVADEV 444
           +  AS     LA  + +I  V++VI+ I+ QTNLLALNAAIEAARAGE GRGFAVVADEV
Sbjct: 354 VLGASNKAEGLAVQAQDISKVLEVIRGIAAQTNLLALNAAIEAARAGEAGRGFAVVADEV 413

Query: 445 RSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGTEQVKLSVDKSLMVRDALQQILNSI 504
           RSLA+RTQDSTEEI++MI  +QQG + +++ + S  EQ   ++ ++     AL++I  +I
Sbjct: 414 RSLAQRTQDSTEEIEQMITGIQQGTQGTVEALNSSAEQAGHTLQRANSAGSALEKITAAI 473

Query: 505 EEINALNAQIATASEEQSSVTEEININITNISEISDQTAEGARQSSDATEDLARLAESME 564
            +I+  N  IA+A+E+Q+ V  +++ ++ NI ++S QTA GA Q+S A+++L+RLA  + 
Sbjct: 474 SQISQRNLVIASAAEQQALVARDVDRSLVNIRDLSTQTAAGATQTSAASQELSRLAVDLN 533

Query: 565 ADIAHY 570
             +A +
Sbjct: 534 GLVARF 539