Pairwise Alignments

Query, 572 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 638 a.a., putative methyl-accepting chemotaxis protein from Pseudomonas putida KT2440

 Score =  258 bits (658), Expect = 7e-73
 Identities = 171/512 (33%), Positives = 290/512 (56%), Gaps = 25/512 (4%)

Query: 64  DLYGQGMQHSIRAGKVLNELEKARSGLLLGFQHDPANAFADMHNHPLSFHIDASRASIKT 123
           DL G+ +Q S+  G  +N+ + A     L  Q     A   +  +  S + D  + ++K 
Sbjct: 149 DLIGR-VQRSLLQGANINQYQHAVDVSALLQQ-----ARFQVRGYTYSGNADYQQTALKA 202

Query: 124 LHDIIDNQILASDLADDERAEVNRLVSLLDKVT-QEGFNPAIQALSQGEY--KRSNQLLL 180
           +     +Q LA   A   +       SL D  T   G+  A+      +   +++ Q ++
Sbjct: 203 I-----DQALAELRALPAKVPAEHAASLDDAATAMGGYRDAVTQFGNAQLASEQALQRMV 257

Query: 181 EKINPLFKDITDQAQAFLDMQIAEAKTSYQASQETVSLYIWLVAIFSGVAMLAISVSSVF 240
           E+   L      QA   +     E + +  A  +T+     ++A+  G+      +++  
Sbjct: 258 EQGTVLL-----QASQMMTASQTEVRDAAAAQAKTLLTVATVLALALGL------LAAWA 306

Query: 241 IIRRVSLSVVQLEETAVDIAAGDLTKRIRLGGHDEFAHIAEHVNRIASDFQQAVTNTHAS 300
           I R++ + + Q    A  +A+GDLT+ +++   DE   +   ++R+    ++ +      
Sbjct: 307 ITRQIIIPLRQTLRAAERVASGDLTQSLQVQRRDELGQLQASMHRMTQGLRELIGGIGDG 366

Query: 301 TSRLASAAEENAVVSTQTQRNVLDQQQQTQLIATAIHEFTATVREVAQSAASAATASQDA 360
            +++ASAAEE + V+ QT   V +Q+ +T  +ATA+++ TATV EVA++A  A+ A+  A
Sbjct: 367 VTQIASAAEELSAVTEQTSAGVNNQKVETDQVATAMNQMTATVHEVARNAEQASEAALMA 426

Query: 361 NGAAHGAQGVVDESIAVIEALAQELSRASEAMTLLAQHSNEIGTVVDVIQAISEQTNLLA 420
           +  A     VV E++A IE LA E+  +SEAM LL   S++IG+V+DVI+++++QTNLLA
Sbjct: 427 DQQAREGDRVVGEAVAQIERLASEVVNSSEAMNLLKTESDKIGSVLDVIKSVAQQTNLLA 486

Query: 421 LNAAIEAARAGEQGRGFAVVADEVRSLAKRTQDSTEEIQKMIQRLQQGARDSMQMMQSGT 480
           LNAAIEAARAGE GRGFAVVADEVRSLA+RTQ STEEI+++I  LQ G +    +M +  
Sbjct: 487 LNAAIEAARAGEAGRGFAVVADEVRSLAQRTQQSTEEIEELIAGLQSGTQRVASVMDNSR 546

Query: 481 EQVKLSVDKSLMVRDALQQILNSIEEINALNAQIATASEEQSSVTEEININITNISEISD 540
           +    SV+ +     +L+ I  ++  I A+N QIATA+EEQ++V EEIN ++ N+ +ISD
Sbjct: 547 QLTDSSVELTRRAGSSLETITRTVSSIQAMNQQIATAAEEQTAVAEEINRSVMNVRDISD 606

Query: 541 QTAEGARQSSDATEDLARLAESMEADIAHYKV 572
           QT+  + +++ ++ +LARL   ++  +  +++
Sbjct: 607 QTSAASEETASSSVELARLGTHLQGLVGRFRL 638