Pairwise Alignments

Query, 837 a.a., diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) (RefSeq) from Shewanella loihica PV-4

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  477 bits (1228), Expect = e-139
 Identities = 243/549 (44%), Positives = 350/549 (63%), Gaps = 1/549 (0%)

Query: 284 QEQLELAANIFENSVEGVVITDASGNIIEVHGAFTEITGYSRDEVLGENPRILNSGRHDK 343
           +E+L +AA +F++++EGV++TD  G I+ V+ AF  ITGY +DEV+G+ P    SG H  
Sbjct: 81  RERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQRPSKFKSGHHGL 140

Query: 344 AFFERLWRSLLTNGKWHGEIWNRRKSGAIYPEQLTISSMYGDDHQVRYFVAVFADISAQK 403
           AF++ ++ +L   G+W GEIWNRRKSG IYP+  TI ++  D+ ++ ++VAVF+DISA K
Sbjct: 141 AFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSHYVAVFSDISAIK 200

Query: 404 QSEKELARLVYHDPLTKLPNRMMLSANLEQELRHAAREETELALIFIDVDLFKHINDSYG 463
            SE+ELA L +HDPLT LPNR++ +  LEQ L  A   +   AL+ +D+D F+ IND  G
Sbjct: 201 HSEQELAYLAHHDPLTGLPNRLLFTDRLEQALAAAQANKRGCALLLLDLDHFQSINDGLG 260

Query: 464 HVTGDAILVEVARRLGQKLGEEATLARLGSDEFIAVLPHVESDDSVSLMVSRLREAFDAP 523
           H  GD +L  V  RLG+ LG   TLARLG DEF  ++ + +       +   + E    P
Sbjct: 261 HTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVLVENCQQVGQAGKLAQCIIERMREP 320

Query: 524 FLLDDEGSVRLTASMGVAIYPGDGESGDTLLRNADTAMHRAKANGRNNYAFYTQSLTLAS 583
           F  D    + ++AS+G+++YP D    + LLRNAD+A+++AK+NGR  YA YT+ LT  +
Sbjct: 321 FQFDGN-RLFISASVGISLYPSDALGAEQLLRNADSALYKAKSNGRACYALYTEELTAHA 379

Query: 584 VEHLKLQSALHDAINKDAFYLVYQPKLALGTGQCVGFEALLRWEDPQLGTISPAIFIPVA 643
              ++  + L  A+ +D   + +QP   L +G+ VG E L+RW+ P+ G + P  FIP+A
Sbjct: 380 QHRVETAAELRRALEQDELRVYFQPVHDLASGRQVGVETLVRWQHPRRGLVPPGEFIPIA 439

Query: 644 ENIGLINEIGLWVLKQAATQGAQWLAEGKRFGRISVNVAGPQLQQKQFCAQVKRVLDEAG 703
           E  GLI EI  WVL+QA  Q  QW A+G++   + VN++     Q +   QV  VL + G
Sbjct: 440 ERTGLIAEIDTWVLRQACRQMVQWQAQGRQLAFVGVNISSRLFGQHELYRQVAEVLHDTG 499

Query: 704 LPPEYLELEVTESCMMSDPLAVIEVLKQLGELGVELSVDDFGTGYSSLNYLKRLPIHKLK 763
           L P  LELEVTES +M DP   +E L +L ELGV L++DDFGTGYSSL  LKRLP+ KLK
Sbjct: 500 LAPALLELEVTESAVMEDPEVALEQLHRLRELGVTLAIDDFGTGYSSLLRLKRLPVQKLK 559

Query: 764 IDQSFIRDIPRDGNNTAIAKAVIALGHALNLCIIAEGVETPEQAAFLEAAGCDQAQGYLY 823
           IDQ F+  +P D ++ AI + +IAL  ++ + + AEG+E  EQA+FL    C   QGY +
Sbjct: 560 IDQGFVAGLPVDEDDIAIVRVIIALARSMGMQVHAEGIEQAEQASFLLQEECQLGQGYWF 619

Query: 824 SKPRMVEEL 832
            +P   E+L
Sbjct: 620 GRPVPAEDL 628