Pairwise Alignments

Query, 640 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 647 a.a., chemotaxis protein from Pseudomonas simiae WCS417

 Score =  265 bits (677), Expect = 5e-75
 Identities = 158/476 (33%), Positives = 257/476 (53%), Gaps = 3/476 (0%)

Query: 166 INYLVQIEGKPSGVAGVGLSLNSLADNIKQYKIGEQGRVYLTDGNGQIKIH-GQSQFAGK 224
           ++ +    G   GV G+ +SL  L + ++  K+G+ G + L +GNG + +    ++   K
Sbjct: 174 VHTVADATGNILGVVGLDVSLKQLTELVRNIKLGDSGYLMLVEGNGNVLVDPSDAKHNFK 233

Query: 225 QLSALGIKDPQALLSQQTFATSEYDNNGVDTLVASRYIPSIGWYLIAEVPQDELFGAINK 284
            L+ LG     A L+++    ++ + +GV  +        +GW  I  + +DE+     +
Sbjct: 234 PLADLGPN--YAELAKRGDGVTQIEIDGVAYMANMVSSKDLGWRFIGLIKRDEVMAGATR 291

Query: 285 ASWQLALMGLILAAIIMFTSAWLINRLISPFGELADMLKSIGEGEGDLSLRLDDSRQDET 344
            +W +A +  +LA +     A   + ++ P   +AD L+ I EGEGDL+ +L    +DET
Sbjct: 292 LTWLIAAIAAVLALVFAIVGASFASVIVRPIRGVADGLQEIAEGEGDLTRQLKVQGKDET 351

Query: 345 GSMAASYNQFVTYLSKTLQSVSATANDLFQAVERIDNQAKHMEHEINDQVSKIEQVATAI 404
            S+A  +NQF++ +++ +Q +   ++DL  A       A +M      Q   +E V+TA 
Sbjct: 352 ASLAGWFNQFLSMIAQLVQRIGNASSDLQSAAADTREVAHNMNQAAGRQREAVELVSTAF 411

Query: 405 HEMGMTAQEIASSANNAAENAQVADQSVNQGNQSVQNTIASVASMSEQLLTTSETVSQLA 464
           +EM  TA E+A S + AA +A    + V+ G Q +     SV  +SE L  +++T+ QL 
Sbjct: 412 NEMVATANEVARSCSAAATSADEGYRDVHDGQQHIGEATGSVLKLSEDLQRSTQTMQQLE 471

Query: 465 EDASSIDTVLEVIRGVSEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRSHASTE 524
           +D+ +I+T+L+ IR ++EQTNLLALNAAIEAARAG+QGRGFAVVADEVR LA R+  ST 
Sbjct: 472 QDSKNINTILDTIRSIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTG 531

Query: 525 DIRHIIEKLQAKTTEVVNAIGQSTNQSQQSQQEASLSGEHLHSIAENIQAMSEMSMQIAT 584
           +I  ++  L  +T EV   +  S   S  S +    + +    I  ++ ++ + + QIAT
Sbjct: 532 EIDSLLGNLARRTQEVTQQMQGSLLVSHTSVERIQQARDSFDKIRGSVDSIRDQNTQIAT 591

Query: 585 ATEEQSNVVGEINPHVTAIADISRSSSDVVRQTSLDCSDLREMAVQLNELVSRFKF 640
           A EEQ  V  EIN H+  I   ++               L +++ QL  LV RFKF
Sbjct: 592 AAEEQHQVAEEINRHIAQIHADAQLVEGFAHSAQTGSGRLTDISGQLKGLVGRFKF 647