Pairwise Alignments

Query, 755 a.a., DNA topoisomerase IV subunit A (RefSeq) from Shewanella loihica PV-4

Subject, 876 a.a., Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  178 bits (452), Expect = 9e-49
 Identities = 131/457 (28%), Positives = 237/457 (51%), Gaps = 44/457 (9%)

Query: 13  EQMPLRRFTEEAYLNYSMYVIMDRALPHIGDGLKPVQRRIVYAMSELGLSAQSKHKKSAR 72
           + +P+    +E +L+Y+ YVI++RA+P I DG KPVQRRI++AM E+      +  K A 
Sbjct: 18  DSVPVTGMYQEWFLDYASYVILERAVPAIEDGFKPVQRRILHAMKEMD---DGRFNKVAN 74

Query: 73  TVGDVLGKYHPHGDSACYEAMVLMAQPFSYRYPLVDGQGNWGAPDDPKSFAAMRYTEARL 132
            +G  + +YHPHGD++  +A+V + Q    +  L++ QGNWG        AA RY EARL
Sbjct: 75  IIGQTM-QYHPHGDASISDAIVNLGQ----KDLLIETQGNWGDIRTGDGAAAARYIEARL 129

Query: 133 SKFSEVLLTELGQGTVDWGVNFDGTLKEPMVLPARLPHILLNGITGIAVGMATDVPPHNA 192
           SKF+  L       T DW V++DG  +EP+ LP + P +L  G+ GIAVG++T + PHN 
Sbjct: 130 SKFA--LEVVFNPQTTDWQVSYDGRKREPVTLPVKFPLLLAQGVEGIAVGLSTKILPHNF 187

Query: 193 RELVDACVELIDNPKVDLERLMELVPGPDYPTEAEIISPRTEIAKIYETGRGSIKARAVY 252
            EL++A V+++   K ++         PD+PT    ++  +E  +    G+  ++AR   
Sbjct: 188 CELINASVDVLKGKKANIV--------PDFPTGG--LADFSEYNEGLRGGKIKVRAR--- 234

Query: 253 SVESGE---IVITALPHQASGGKILEQIAAQMQAKKLPMVADLRDESDHESPVRIVIVPR 309
            +E G+   ++I  +P   +   +++ I       K+  +  + D +  +  +++ + P 
Sbjct: 235 -IEEGDGKSLLIKDIPFGTTTTSLIDSIIKANDKGKI-KIKKVVDNTAKDVEIQVFLAPG 292

Query: 310 SNRVDCDQLMAHLFATTDLEKNFRVNLNVLGLNGRPQVKGLKQLLTEWLEFRLTTVRRRL 369
            +    D  +  L+A TD E++   N  V+ ++ +P   G+  +L          ++R L
Sbjct: 293 QSP---DMTIDALYAFTDCEQSISPNACVI-IDDKPVFMGVNDILAYNTTQTKALLKREL 348

Query: 370 EHRLDKVLARL--HILEALMI---AFLNIDE------VIEIIRYHDDPKAELMSRFNLTD 418
           E R  +++ +L    LE + I    + +I+E      VI+ I    DP      R  +T 
Sbjct: 349 EIRKGELMEKLLFSSLEKIFIENRIYRDIEECETWEDVIDTIDKGLDPHKPDFYR-EITK 407

Query: 419 EQANAILDLKLRHLAKLEEFKIKTEQSELEAEREKLE 455
           +    + ++K++ +++ + FK      +LE E +++E
Sbjct: 408 DDIIRLTEIKIKRISRFDSFKADELMRKLEDELKEVE 444