Pairwise Alignments

Query, 552 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

Subject, 722 a.a., Protein secretion ABC efflux system, permease and ATP-binding protein from Pseudomonas putida KT2440

 Score =  167 bits (424), Expect = 1e-45
 Identities = 142/523 (27%), Positives = 242/523 (46%), Gaps = 14/523 (2%)

Query: 7   LLAQNQSFNELLLTSVFINLLSLALPFTMLQIYDRILPNEAHGTATVLVIGVAIAILLEL 66
           +L   + + ++++ S+  N+L+LA     +Q+YDR++P E+  T  VL  GV +A++ + 
Sbjct: 169 VLRDLRPYGQVMIASLVANVLALAGVLFSMQVYDRVIPAESLPTLYVLFGGVVLALVFDF 228

Query: 67  ILRYAR---SWLLGASAANYELHTITRVVKRLLNADYHHIENLGAGKISHGIHSIAAMRD 123
            +R  R   + LLG  A       +     RL N+    +     G     +  + ++RD
Sbjct: 229 SMRLLRLKVTDLLGKRADLRVSDLVYGHALRLRNS----VRPKSTGSFISQLRELESIRD 284

Query: 124 IYSGQAAVALMDFPFVLIFLALVAYIGGPLVFIPLIVWLIAGVRVWQLGQKLSLATKELS 183
           + +   A  L D PF L+FL +   IGG LVFIPL+  L+A V    L Q+        S
Sbjct: 285 LITSSTATVLADLPFFLLFLFVFWLIGGVLVFIPLVA-LLAMVLPGLLAQRRLARLANAS 343

Query: 184 LSQDE-RTRLLMLVLSGLTTTKAMALESRMTYAYKKINHQRLAQQEEVDWLSAKLQELIQ 242
           + +   R  +L+  + GL   KA+  E+R    + + N         +  L+  L    Q
Sbjct: 344 MRESALRNAMLVESIQGLDEIKALQAEARFERQWNQYNAACAHTNLRLRTLTNGLVTWTQ 403

Query: 243 GTAQATTLCLVMIGCFEVLNGNLTTGGLAACSILAGRAVAPLSAIGSLRAKYVSAKEAMD 302
               A    +++IG   V+ G+LTTG L A S+L+ R +APL+ +  +  ++  AK A+ 
Sbjct: 404 NVQGAVFAVVIVIGAPMVIAGDLTTGSLVAASMLSSRMMAPLAQLTHVLTRWQQAKVALQ 463

Query: 303 QVNALIATPQETFNGQTRYQQKLPLGPISFESVS---AEKTSARLDNISLTIPAGCIVTV 359
            ++ L+ +P +   G+ R       G       +   +E     L+   L I  G  + V
Sbjct: 464 GLDKLMQSPVDHPEGEARVHLPAIHGEYRLRQANFRYSEDYPPVLNIGRLDIQPGERIAV 523

Query: 360 TSNPMTHASLLLSTIGAYHQLDSGQIAIAGVPQQDHDGFEYRQSICYVPPWASLFSGSIL 419
                   S LL  +G    L  G+I++ G+     D  + R+ +  +P +A LF G++ 
Sbjct: 524 LGRNGAGKSTLLQALGGAMDLVQGEISLDGIAMAHLDPADLRRDVGLLPQYARLFHGTLR 583

Query: 420 ENMTLFRREREASAMLIA-DQLGLSATLAQLPAGYQTQVGSNENQVLNKGAIKLIALVRA 478
           EN+TL   +     ++ A    G    + +LP G    +       L+ G  + + L R 
Sbjct: 584 ENLTLGAGQASDQELVAALAATGALDFVRRLPKGMDHLI-LEGGLGLSGGQRQALVLSRL 642

Query: 479 LAQSPSILLLDEPMVSLDADSQARLLQVLMERRGQMTVVIASY 521
           L + P +LLLDEP  SLD  ++ +LL  L       T+VIA++
Sbjct: 643 LVRQPQVLLLDEPTASLDDMTERKLLDNLERFCQGRTLVIATH 685