Pairwise Alignments

Query, 457 a.a., amino acid carrier protein (RefSeq) from Shewanella loihica PV-4

Subject, 481 a.a., sodium:alanine symporter from Pseudomonas simiae WCS417

 Score =  267 bits (683), Expect = 5e-76
 Identities = 161/438 (36%), Positives = 241/438 (55%), Gaps = 23/438 (5%)

Query: 6   LLSEINAIVWGPITLCLLVGTGLYLTLRLRLIQVFKLPLALRLLFKPA--SGQGDLSSFA 63
           +L  IN  + G + + L+VG G Y T+R R +Q+      +  +FK +  S  G LSSF 
Sbjct: 1   MLEVINDFLSGKVLIVLIVGLGGYFTIRSRFVQLRHF-FHMFSVFKDSLKSSAGQLSSFQ 59

Query: 64  ALCTALSATIGTGNIVGVATAIKVGGPGALFWMWLAAFFGMATKYGECMLALKYRTTDAR 123
           AL  +L+  +G GNI GV  A+ +GGPGA+FWMW+ A  GM++ + EC L   Y+ TDA 
Sbjct: 60  ALMLSLAGRVGAGNIAGVGIAVTLGGPGAVFWMWVTALVGMSSSFIECSLGQLYKRTDAE 119

Query: 124 GNIAGGPMYYIERGLGLGWLAKLFA---LFGVGVAFFGIGTFAQVNAISDAMTIAFHVPA 180
           G   GGP YYI+ GL   WL  + A   L   G AF G+    Q +A++ ++  AF +  
Sbjct: 120 GTYRGGPAYYIQHGLQKRWLGMVMAFLLLVTFGFAFNGL----QAHAVTHSLNNAFGLDT 175

Query: 181 WVTALVLTLLVAAVTLGGVKRIAKVAQKLVPSMALGYVLACLWILVTFSEQIIPALQLVI 240
             T L L +L+  V +GG+KRIA +A  LVP   L Y+   L+++V   + +   L  ++
Sbjct: 176 TYTGLALAVLLGLVFIGGIKRIASIADLLVPVKTLVYIAVTLYVIVLQFDHVPAMLATIV 235

Query: 241 HSAFSPISAAGGFLGATVAQAIQIGIARGVFSNESGLGSAPIAAAAAKTKEPVEQGLVSM 300
            SAF    A GG +G+    AI +G+ RGVF+NE+GLGSAP  AA A  + P+ QG+V  
Sbjct: 236 KSAFGLDQAFGGLVGS----AIIMGVKRGVFANEAGLGSAPNVAAVASVEHPIAQGVVQA 291

Query: 301 TGTFFDTLLICTITGLVLIITGVWS----GDAAGAAMTSAAFATGGSAVIGQYLVTIALV 356
              F DT +ICT T L+++++G ++    GD       S A   G     G+  +++AL 
Sbjct: 292 FSVFLDTFVICTCTALLILLSGFYTPGFEGDGIALTQNSLAAVVGD---WGRMFISVALA 348

Query: 357 CFAFTTILGWHYYGERCWYYLTGHKLGERGIKIYQFIFLSLIAVGAFIQLDLIWLLADTV 416
            F FT+I+  +Y GE    +L G+    + +  Y+ + L LI  G+   L  ++  AD  
Sbjct: 349 LFVFTSIMYNYYLGESNLRFLVGN--NRKVLMGYRALVLVLIFWGSIENLSTVFAFADIT 406

Query: 417 NGLMAIPNLIALIGLRKV 434
             ++A  NL AL  L K+
Sbjct: 407 MTMLAFVNLFALAFLFKI 424