Pairwise Alignments

Query, 530 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 626 a.a., methyl-accepting chemotaxis protein from Pseudomonas fluorescens SBW25

 Score =  174 bits (441), Expect = 9e-48
 Identities = 113/343 (32%), Positives = 182/343 (53%), Gaps = 3/343 (0%)

Query: 41  LALLVIDYLFILSVLLALNSMFGRLRSAAIHLSEGDLRVRLD-TQEALGGPLFKAFNQIG 99
           +A+ V+  L I  +L  L +M   ++  A    EGDL  RLD T +   G +  AFNQ  
Sbjct: 284 VAIAVLLSLLIQVLLRPLTTMGVAMQDIA--QGEGDLTRRLDVTSKDEFGEVGSAFNQFV 341

Query: 100 EDVSRTVFSLSKSAQQLVRVADTVQADSQVSKTGALRQKDDVEEAKQIVSKLFETTAEVS 159
           E +  ++  +S + +Q+  ++  V A S  S  G+  Q          +++L   T E++
Sbjct: 342 ERIHASISEVSSATRQVHDLSQRVMASSNASIIGSDEQSARTNSVAAAINELGAATQEIA 401

Query: 160 SFCESTSQLASESKRQADRGKQEMRSLETALEDVGEQFAASDQNFEQLKQESLQIGQVVE 219
                 SQ AS +  QAD G++ +     A+ ++ ++ + S    E L   +  IG +++
Sbjct: 402 RNAADASQHASGASEQADDGRKVVEQTILAMSELSQKISLSCTQIETLNASTDNIGHILD 461

Query: 220 TIKGIAEQTNLLALNAAIESARAGELGRGFAVVADEVRSLALRTQVATEDINNKIVNLQT 279
            IKGI++QTNLLALNAAIE+ARAGE GRGFAVVADEVR+LA RTQ + E+I+  I +LQ 
Sbjct: 462 VIKGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQV 521

Query: 280 QINDAIAAMQKNRQSVLHSQSVANEAESHFEELVSQIDAIDALGQEIAVASQHQVEQTQM 339
              +A++ M  ++ S   S  VAN+A      +  +I  ID + Q +A A++ Q    + 
Sbjct: 522 GSREAVSTMNASQTSSEESVQVANQAGERLISVTKRIVEIDGMNQSVAAATEEQTAVVET 581

Query: 340 LETCLVEVDKVSDENVKATQETLLASITVRNLAGEIDSLLHRF 382
           L   + +++ ++ + V    ETL     +   A  +  L+  F
Sbjct: 582 LNVDINQINLLNQQGVTNLNETLKDCDALSQQASRLKQLVDSF 624