Pairwise Alignments

Query, 388 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

Subject, 400 a.a., BamA/TamA family outer membrane protein from Bacteroides stercoris CC31F

 Score = 89.0 bits (219), Expect = 2e-22
 Identities = 84/352 (23%), Positives = 138/352 (39%), Gaps = 37/352 (10%)

Query: 63  YTPEKKFGVGLLMVGLYKTDGAAPEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQRL 122
           YTP+    +G   +  ++ + +   +  S L ++          + V+   FF G + R+
Sbjct: 60  YTPDFGALIGGSALMTFRMNPSDTTQLRSVLPMSIAYMFKGGVNLMVKPQLFFKGDRFRI 119

Query: 123 LLGLELHNEASVYYGRGIADGNIDSNHHEFDEQLYS---FTPRWMTQVAD-NYFVGVGVD 178
                  N    +YG G              +  YS     P ++ ++ + N F G  VD
Sbjct: 120 FGKFVYKNTEDNFYGIGYGTNKDYVRSDSTSKYRYSGIQINPWFLFRLGESNVFAGPQVD 179

Query: 179 FTYASADKFTRVEGDIPLPSDGILPS-------NFSSGLVVTSIYDSRDYRLNATKGWLF 231
             Y   DK T     +    D +          NF++GL     YDSRD   NA +G   
Sbjct: 180 INY---DKITDPAKHLIEEPDYVAAGGTANGYKNFNAGLGFLLTYDSRDIPANAYRGVYL 236

Query: 232 QLDAGLYQNS--EYDSFAKYDLELANYIDLSTTSWLSQMPGLIAWQVQGHFTSGDVPWNM 289
                +Y  +    ++F + +L+   Y  +           + AW  Q     G+VP   
Sbjct: 237 DFRGMMYSKAFGSDNNFYRLELDYRQYKSVGHRK-------VFAWTAQSKNVFGNVPLTQ 289

Query: 290 LPDLGGSSAMRGYIKGRYRDKQMMMGQVEYRLPI-----------FQRYGMVFWGGVGSV 338
               G    +RGY  G+YRDK   +   EYR  I               G V W G G +
Sbjct: 290 YSLTGTPFDLRGYYMGQYRDKSSHVVMAEYRQMINTDRSNWIKRLLHHIGFVAWTGCGFM 349

Query: 339 ADKVSDLNDELLTSYGTGFRFKIKDNINLRLDVGVG--ENETNFYLNVNEVF 388
              +  + + +L +YG G R +++  +N+RLD+G     ++T FY N+ E F
Sbjct: 350 GPTMGKI-EGVLPNYGVGLRIEVQPRMNVRLDLGKNTVNDQTLFYFNMTEAF 400