Pairwise Alignments

Query, 210 a.a., CheD, stimulates methylation of MCP proteins (RefSeq) from Shewanella loihica PV-4

Subject, 233 a.a., chemotaxis protein CheD from Ralstonia solanacearum PSI07

 Score =  139 bits (350), Expect = 4e-38
 Identities = 76/193 (39%), Positives = 117/193 (60%), Gaps = 7/193 (3%)

Query: 21  WDSRHDAVVARVDPGNFYVTAHDELIFTRLGSCVAACIWDPLLGIGGLNHFLLPERQLHE 80
           +D+       +V PG +YVT  D ++ T LGSCV+AC+ D +LGIGG+NHF+LP R   E
Sbjct: 43  YDTTFSRRAMKVLPGEYYVTTEDLMLVTVLGSCVSACVRDKILGIGGMNHFMLPSRNESE 102

Query: 81  DWHQLTSYTCRYGNWAMEQLINSILSLGGMRNRLKAKVFGGAQMTA-TSVLNVGESNISF 139
               + S + RYG  AME L+N +   G  R  L+ KVFGGA + A  S L+VGE N  F
Sbjct: 103 ---SILSPSMRYGTHAMEVLLNQLYRAGARREHLEIKVFGGAAVLAGMSTLDVGERNGKF 159

Query: 140 VKNYLKTEGIEIVSEDLGGPWPRKVLFHPNSGKVKLMRLSPERISKMMSEEQRY---LKQ 196
           V  +L++EG+ + ++DL    PRKV F P++G++ + +L  +  +  +  E +Y   L +
Sbjct: 160 VLEFLRSEGLPVAAKDLFDVHPRKVYFVPSTGQIMVRKLRSQGSAAELDSEAQYASKLSK 219

Query: 197 IVTAQGESQVELF 209
            + A+  S+++LF
Sbjct: 220 SIAAKPASRLQLF 232