Pairwise Alignments

Query, 210 a.a., CheD, stimulates methylation of MCP proteins (RefSeq) from Shewanella loihica PV-4

Subject, 180 a.a., chemotaxis protein CheD from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  108 bits (269), Expect = 8e-29
 Identities = 61/142 (42%), Positives = 86/142 (60%), Gaps = 7/142 (4%)

Query: 32  VDPGNFYVTAHDELIF-TRLGSCVAACIWDPLLGIGGLNHFLLPERQLHEDWHQLTSYTC 90
           V  G  ++T+   ++  T LGSCVA C+ DPL G+GG+NHFLLPE          T    
Sbjct: 16  VGQGEHFITSDPNVVLSTILGSCVAMCVRDPLAGVGGMNHFLLPEGS-----GAGTDAGR 70

Query: 91  RYGNWAMEQLINSILSLGGMRNRLKAKVFGGAQMTATSVLNVGESNISFVKNYLKTEGIE 150
           RYG +AME LIN +L  G  R+RL+AK+FGG +M   S+ +VG SN  F + +L+ EGI 
Sbjct: 71  RYGAYAMELLINDMLKAGARRDRLEAKLFGGGRM-FDSLRDVGRSNADFAEKFLRDEGIP 129

Query: 151 IVSEDLGGPWPRKVLFHPNSGK 172
           +V   L G   R++ + P +G+
Sbjct: 130 VVGGSLRGDGGRRLHYWPVTGR 151