Pairwise Alignments

Query, 366 a.a., ABC-2 type transporter (RefSeq) from Shewanella loihica PV-4

Subject, 376 a.a., ABC transporter permease from Rhodanobacter sp000427505 FW510-R12

 Score =  127 bits (320), Expect = 4e-34
 Identities = 103/376 (27%), Positives = 181/376 (48%), Gaps = 25/376 (6%)

Query: 6   LRRIKSITTKEIRQLKRDRITFGMVVMIPLIQLLLFGYAINTDVRNVPVVVVDQSHSAAG 65
           LR I  +  KE+R L RD I   ++V      +     A+   +   P+ V+D+  S   
Sbjct: 6   LRNIVYLGLKELRSLLRDPIMLVLIVYAFSFSIYTAATAMPETLHKAPIAVIDEDRSPLS 65

Query: 66  RWIVEAVKVTQVVSIEKHYASAEEAEAAITRGEVRAALILPPNLT-EKLANGETLGQWVV 124
             IV+A++    +   +   +  E +A +  G    AL +P N   + L       Q  V
Sbjct: 66  ERIVDALRPPYFMPPTR--ITPAEMDARMDAGLDTFALYIPANFQRDMLVRRSPAIQLSV 123

Query: 125 DGSDTMVA-SAISQLRNMPLDQITG----QDTQRLPTFEVALF--YNPEQRSAVNIVPGL 177
           D +    A +    ++ + LDQ+      +     P  ++AL   +NPE   +     G+
Sbjct: 124 DATRMGQAFTGSGYIQTIVLDQVNEFARREHAVSSPPVDLALRARFNPELNKSW--FGGV 181

Query: 178 IAVI--LTMTMILFTSAAIVRERERGNLELLITTPIKPLELMLGKIVPYILVGLVQMTII 235
           + +I  +TM  I+ T AA++RERE G LE L+  P+ P E+M  K++    V LV     
Sbjct: 182 MQIINNITMLSIVLTGAALIREREHGTLEHLLVMPVAPFEIMASKVLAMAAVVLVASAFA 241

Query: 236 LGLG-HLIFDVPINGAIAQLLMGTLLFIAASLTLGLIISTIAKTQLQAMQMTIFIILPTI 294
           L +    +  VPI G++    +G  L + A+ +LG++++T+A++  Q   + + ++LP  
Sbjct: 242 LNVVVRGLMGVPIEGSLPLFFVGATLHLFATTSLGILLATLARSMPQFGMLLLMVLLPLQ 301

Query: 295 LLSGFMFPFEAMPKPAQWIAELLPATHFMRIIRAIVLRGGALSDMQFDALW--LIGFTLV 352
           +LSG   P E+MP+  +++    P THF+ + + I+ RG  L     D +W  LI   ++
Sbjct: 302 MLSGGSTPRESMPEIVRFVMLAAPNTHFVMLSQGILYRGAGL-----DVVWPQLISLAVI 356

Query: 353 G---ILVASLRFNKRL 365
           G    +++  RF K L
Sbjct: 357 GSILFMISLARFRKTL 372