Pairwise Alignments

Query, 366 a.a., ABC-2 type transporter (RefSeq) from Shewanella loihica PV-4

Subject, 367 a.a., ABC-2 type transporter from Bacteroides ovatus ATCC 8483

 Score =  224 bits (571), Expect = 3e-63
 Identities = 121/367 (32%), Positives = 221/367 (60%), Gaps = 6/367 (1%)

Query: 6   LRRIKSITTKEIRQLKRDRITFGMVVMIPLIQLLLFGYAINTDVRNVPVVVVDQSHSAAG 65
           +R+  +   KE   + RDR T  +++ +P++Q++LFG+AI+T+V+NV + V+D S+    
Sbjct: 1   MRQFIAFIKKEFYHIFRDRRTMLILLGMPVVQIILFGFAISTEVKNVRLAVLDPSNDVVT 60

Query: 66  RWIVEAVKVTQVVSIEKHYASAEEAEAAITRGEVRAALILPPNLTEKLANGETLGQWVVD 125
           R I++ +  ++  ++   + S +E EAA  + EV  A++      + L  G+   Q +VD
Sbjct: 61  RKIIDRLDASEYFTVTARFHSPQEMEAAFLKNEVDMAIVFSERFADDLYTGDARVQLIVD 120

Query: 126 GSD-----TMVASAISQLRNMPLDQITGQDTQRLPTFEVALFYNPEQRSAVNIVPGLIAV 180
            +D     + V  A   +  +  + I    +    T ++ L YNP+ +SA N VPG++ +
Sbjct: 121 ATDPNMSTSQVNYATGIVSMVGQEMIPPNMSAARLTPDIKLLYNPQMKSAYNFVPGVMGL 180

Query: 181 ILTMTMILFTSAAIVRERERGNLELLITTPIKPLELMLGKIVPYILVGLVQMTIILGLGH 240
           IL +   + TS +IVRE+E G +E+L+ +P+KPL ++L K VPY ++  V +  IL L  
Sbjct: 181 ILMLICAMMTSISIVREKETGTMEVLLVSPVKPLFIILAKAVPYFVLSFVNLITILLLSV 240

Query: 241 LIFDVPINGAIAQLLMGTLLFIAASLTLGLIISTIAKTQLQAMQMT-IFIILPTILLSGF 299
            + DVP+ G++  L+  +LLFI  SL LGL+IS++ +TQ+ AM ++ + +++PT+LLSG 
Sbjct: 241 FVLDVPVVGSLFWLITVSLLFIFVSLALGLLISSVTRTQVAAMLVSGLMLMMPTMLLSGM 300

Query: 300 MFPFEAMPKPAQWIAELLPATHFMRIIRAIVLRGGALSDMQFDALWLIGFTLVGILVASL 359
           +FP E+MP   QWI+++LPA  +++ +R +++ G  ++ +  +   L+    V I ++  
Sbjct: 301 IFPIESMPVILQWISDILPARWYIQAVRKLMIEGVPVALVYKEIGILLLMATVLITISIK 360

Query: 360 RFNKRLD 366
           +F  RL+
Sbjct: 361 KFKYRLE 367