Pairwise Alignments

Query, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

Subject, 372 a.a., Membrane fusion component of tripartite multidrug resistance system from Pseudomonas fluorescens GW456-L13

 Score = 71.2 bits (173), Expect = 4e-17
 Identities = 64/279 (22%), Positives = 133/279 (47%), Gaps = 21/279 (7%)

Query: 10  VALIALVAILAYGLMLAHTPKAERLQGQIEAREYNISSKVPGRVAQVMVRRGDQVAEGDL 69
           V L+ +++++ Y +   +TP  +  Q +++A    ++++V GRV +V VR    V  G+L
Sbjct: 27  VVLLIILSLVWYLMADRYTPYTQ--QARVQAFIVPVAAEVSGRVTKVHVRNNQDVKAGEL 84

Query: 70  LFAIDSPELNAKLMQAQGGRDAAKALQQEADNGARKQQVA--ASKEQWLKAKAAATLAET 127
           LF ++  +    + +A+   ++ +        G   +Q +  AS+   LKA+      E 
Sbjct: 85  LFEVNPEQYQIAVDRARADLESTRRQVGANTAGVDSKQASLRASQANELKARQDIQRLER 144

Query: 128 TYKRVEALFSEGVL--ARQKRDEAFTQWQAAKYTQQAAYAMYQMAEEGAREETKAAAEGN 185
            Y+      S   L  +R   +E+ +Q  AAK   Q A           RE+     + N
Sbjct: 145 LYREDPGTISLRRLEISRATLEESISQVAAAKAEVQRA-----------REQQGGNEDEN 193

Query: 186 ARMAEGA--VKEVSAILADSQMRSPKSGEVSEVLLHPGELAPSGFPVVSVIDMQDAWAVF 243
           A++   A  +++    L+++++ +  +G ++++    G+ A +G PV+++I + D W   
Sbjct: 194 AQLLSAASNLEKAELDLSNTKVHARSAGLITDLRTDVGQFASAGAPVMTLIAIHDVWISA 253

Query: 244 QVREDQLKGFKVGDTLEVEIPALGERYPFKVAHISVMGH 282
            + E+ L   + G  + + + AL  R  FK  H+  +G+
Sbjct: 254 DMTENNLGSVQPGTPVSIVLDALPGRI-FK-GHVRSVGY 290