Pairwise Alignments

Query, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

Subject, 334 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  235 bits (600), Expect = 1e-66
 Identities = 126/319 (39%), Positives = 183/319 (57%)

Query: 2   RTNRILAIVALIALVAILAYGLMLAHTPKAERLQGQIEAREYNISSKVPGRVAQVMVRRG 61
           R  R +AIVA + +V ++  GL LA  P  E+LQG ++A E N+ +K   RV +++   G
Sbjct: 11  RNTRPIAIVAGVIVVVVIVLGLWLASRPAPEQLQGMVDADEVNVGTKALARVERLIAEEG 70

Query: 62  DQVAEGDLLFAIDSPELNAKLMQAQGGRDAAKALQQEADNGARKQQVAASKEQWLKAKAA 121
            +V  G LL  + SPE+     QAQG  DAA+A+  E + GAR + +A  +  W  A+AA
Sbjct: 71  QRVQPGTLLATLSSPEIAGGQAQAQGALDAARAVASETNEGARSEDIATLRSTWQAAQAA 130

Query: 122 ATLAETTYKRVEALFSEGVLARQKRDEAFTQWQAAKYTQQAAYAMYQMAEEGAREETKAA 181
           A LA  T +R   L+++GV+A Q+RDEA     ++    +AA   Y  A  GAR + K A
Sbjct: 131 ADLAAVTSRRTANLYAQGVVAAQRRDEAAAARDSSARNAEAARQQYLKALAGARPQNKQA 190

Query: 182 AEGNARMAEGAVKEVSAILADSQMRSPKSGEVSEVLLHPGELAPSGFPVVSVIDMQDAWA 241
           A    R+AE A++  +A+  ++Q+ SP +GEV+  L+ PGE+     P   VID+   W 
Sbjct: 191 ANAQVRIAEAALRTANALDRETQLFSPIAGEVARKLVQPGEVVSPVIPAYQVIDIDHPWV 250

Query: 242 VFQVREDQLKGFKVGDTLEVEIPALGERYPFKVAHISVMGHFATWRSTESGHDFDMRTFE 301
              +RED+  G  +G  L   IPAL     FKV  ++  G FATWR+T     +D+RTFE
Sbjct: 251 ALNLREDRYHGLGIGSVLHGHIPALQRDADFKVYLVAPRGDFATWRATREASGYDVRTFE 310

Query: 302 MELRPVTPIADLRVGMTSL 320
           + L PV+PI  LR GM+ L
Sbjct: 311 IRLHPVSPIEKLRPGMSVL 329