Pairwise Alignments

Query, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

Subject, 319 a.a., putative translation-related protein from Pseudomonas putida KT2440

 Score =  100 bits (250), Expect = 4e-26
 Identities = 92/306 (30%), Positives = 143/306 (46%), Gaps = 30/306 (9%)

Query: 8   AIVALIALVAILAYGLMLAHTPKAERLQ---GQIEAREYNISSKVPGRVAQVMVRRGDQV 64
           A++AL+A    L Y   L H    E L    G++EA E  I+SK+PGR+A+V+V  GD V
Sbjct: 12  ALIALLAAAGGLGYWKSL-HDQLPEGLSMGNGRLEATEVQIASKIPGRLAEVLVDEGDNV 70

Query: 65  AEGDLLFAIDSPELNAKLMQAQGGRDAAKALQQEADNGARKQQVAASKEQWLKAKAAATL 124
             G LL  ID+     + M+AQ  +  A+ L+      AR+   AA     L+ ++   L
Sbjct: 71  IRGQLLARIDT-----RTMEAQRSQAEAEVLR------ARENYAAAQASVQLR-QSELLL 118

Query: 125 AETTYKRVEALFSEGVLARQKRDEAFTQWQAAKYTQQAAYAMYQMAEEGAREETKAAAEG 184
           A    KRV  +F     ++Q  D+           QQA +     A   AR +  AA + 
Sbjct: 119 ASQELKRVREIFQRKFASQQLLDQ-----------QQARFDTANAAVVAARAQL-AAIKA 166

Query: 185 NARMAEGAVKEVSAILADSQMRSPKSGEVSEVLLHPGELAPSGFPVVSVIDMQDAWAVFQ 244
               AE  V ++++ + DS +R+P +G +   L  PGE+  +G  V+ +ID  D +    
Sbjct: 167 AIGAAEAQVAQLTSEIDDSSLRAPINGIIQLRLAEPGEVLGAGGRVLMLIDPSDQYMNLY 226

Query: 245 VREDQLKGFKVGDTLEVEIPALGER-YPFKVAHISVMGHFATWRSTESGHDFDMRTFEME 303
           +         VGD   + + AL ER  P KVA ++    F T +  E+  +     F ++
Sbjct: 227 LPASTSGRLTVGDQARIVLDALPERALPAKVAFVAAKAQF-TPKQVETRDERQKLVFRVK 285

Query: 304 LRPVTP 309
           LR   P
Sbjct: 286 LRLSDP 291