Pairwise Alignments

Query, 323 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

Subject, 368 a.a., secretion protein HlyD family protein (RefSeq) from Shewanella loihica PV-4

 Score = 71.6 bits (174), Expect = 3e-17
 Identities = 70/293 (23%), Positives = 131/293 (44%), Gaps = 25/293 (8%)

Query: 3   TNRILAIVALIALVAILAYGLMLAHTPKAERLQGQIEAREYNISSKVPGRVAQVMVRRGD 62
           T  I A+VA + L  + A  +    TP  +  Q ++  +   IS +V G ++QV++    
Sbjct: 24  TYYIFALVAALWLYTLWADRM----TPMTD--QARVNGQLIRISPEVSGPISQVLITNNS 77

Query: 63  QVAEGDLLFAIDSPELNAKLMQAQGGRDAAKALQQEADNGARKQQVAASKEQWLKAKAAA 122
            V  GD L  ID       +  A+     A A   EAD+ A    ++ ++   + A+   
Sbjct: 78  IVKAGDELVTIDPRPFELAVKAAKFDLQQA-AQSYEADSAA----ISVAQANEVAARVKV 132

Query: 123 TLAETTYKRVEALFSEGVLARQKRDEAFTQWQAAKYTQQAAYAMYQMAEEGAREETKAAA 182
             A+   +R   L ++G +++   D    + + A    QA  A    A E A++E     
Sbjct: 133 NNAKKNVERNRVLANKGTISQAVMDNIIAELETA----QAGLAQASSALEKAKQEFGPRG 188

Query: 183 EGNARMAEGAVKEVSAILA--DSQMRSPKSGEVSEVLLHPGELAPSGFPVVSVIDMQDAW 240
             N  +     ++  A+L    +++ +P +G ++ + +  G+ A +G P+++ I+  + W
Sbjct: 189 IDNPEIQSVLNRQEQALLNLNHTKLTAPANGVITNMDVAVGDYAAAGQPLLTFINNNNLW 248

Query: 241 AVFQVREDQLKGFKVGDTLEVEIPAL-GERYPFKVAHISVMGHFATWRSTESG 292
               VRE+ L   K GD +++   A  GE Y  K++ I        W S+ +G
Sbjct: 249 LTAMVRENSLAHLKPGDKVKIVFDATPGEVYEGKISSIG-------WGSSGNG 294