Pairwise Alignments

Query, 215 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 339 a.a., 4Fe-4S dicluster domain-containing protein from Magnetospirillum magneticum AMB-1

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 58/203 (28%), Positives = 94/203 (46%), Gaps = 18/203 (8%)

Query: 2   LAPLGCSVKEQ-TAQDAAPHYVMVFDQNKCVGCGGCKEACNKANNLP-EGRSRVLLEQQS 59
           LAP G   +E     D A    +++D   C+GC  C  AC +AN+LP E      L    
Sbjct: 26  LAPAGAEARESHKVPDNAVG--LLYDATLCIGCKACMSACKEANDLPLEDTIGEKLWDTP 83

Query: 60  SAVAG---------QACPHCGKTDCDCQRKYVRVSCQQCQNAPCVSVCPTGAAHRDPKTG 110
             ++G         Q+     K   +    +++ SC  C +  CVS CP  A  +    G
Sbjct: 84  LELSGKTYNVIKVYQSGTMENKDKAENGFAHIKRSCLHCADPSCVSACPVSAMQKRATDG 143

Query: 111 IVTMDASKCAGCKYCIAACPYNA---RYINSETDVADNCDFCLQSKLAKGELPACVQECR 167
           +VT +   C GC+YC+AACP+     +Y   + ++A  C  C + ++ +G+  AC + C 
Sbjct: 144 VVTYNKDACIGCRYCVAACPFGVPQFQYDTPKPEIA-KCQLC-KHRMEQGKYAACAESCP 201

Query: 168 YDALVFGDANDPNSYVSRLLAVK 190
             A +FG     ++ + R  A+K
Sbjct: 202 TGATIFGSYAALSAEIDRRRAMK 224



 Score = 35.0 bits (79), Expect = 2e-06
 Identities = 16/43 (37%), Positives = 25/43 (58%), Gaps = 5/43 (11%)

Query: 92  APCVSVCPTGA----AHRDPKTGI-VTMDASKCAGCKYCIAAC 129
           A C ++ P GA    +H+ P   + +  DA+ C GCK C++AC
Sbjct: 21  AACATLAPAGAEARESHKVPDNAVGLLYDATLCIGCKACMSAC 63