Pairwise Alignments

Query, 317 a.a., porphobilinogen deaminase (RefSeq) from Shewanella loihica PV-4

Subject, 318 a.a., Porphobilinogen deaminase (EC 2.5.1.61) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  260 bits (664), Expect = 3e-74
 Identities = 158/310 (50%), Positives = 198/310 (63%), Gaps = 12/310 (3%)

Query: 8   SMSQNVIRIATRKSPLAMWQAEFVKAELEKAHEGLVVELLPMSTKGDVILDTPLAKVGGK 67
           S S   I IATR+S LA+WQAE VKA LE    G  V LL M+T GD ILD  L+KVGGK
Sbjct: 4   SSSPLAITIATRESRLALWQAEHVKALLEGL--GHRVTLLGMTTLGDQILDRSLSKVGGK 61

Query: 68  GLFVKELEVAMLEGKADIAVHSMKDVPVDFPEGLGLQVICEREDPRDAFVSNTYKNIEEL 127
           GLFVKELE+A+ +G+ADIAVHS+KDVP++ P G  L  + EREDPRDA+VS     + +L
Sbjct: 62  GLFVKELELALEDGRADIAVHSLKDVPMELPPGFALACVMEREDPRDAWVSPHCAGLADL 121

Query: 128 PQGAIVGTSSLRRQCQIRAA-----RPDLEIRDLRGNVGTRLAKLDAGNYDAIILAAAGL 182
           P   +VGTSSLRR   +RAA     R D+ I  LRGN+ TRL KLD G Y AI+LAAAGL
Sbjct: 122 PANGVVGTSSLRRLVLLRAALNQLGRDDVRIEPLRGNLDTRLRKLDEGRYHAIVLAAAGL 181

Query: 183 KRLKLEDRIASFISAEDSLPANGQGAVGIECRTDDERVKALLAPLEHIETRYRVIAERAM 242
           KRL LE RI       +SLPA GQGA+GIE R D   + A LAPL H+ T  RV AER +
Sbjct: 182 KRLGLEARIRHIFEPVESLPAAGQGALGIEVRADRADLIAALAPLVHLPTWLRVAAERTV 241

Query: 243 NTRLEGGCQVPIGAYAEIDGD-TLSLRGLVGNPDGS----QVIRGTTSGAKQDAEQLGIA 297
           +  + G C +P+ AYA+   +  L L    G+P+G     +V + ++     +AE LG  
Sbjct: 242 SRAMGGSCSMPLAAYADWGREGALRLDAAWGDPEGQAPLVRVGQQSSVTTLDEAEALGQQ 301

Query: 298 LADELLSKGA 307
           +A  L + GA
Sbjct: 302 VAQALRAAGA 311