Pairwise Alignments

Query, 181 a.a., 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein (RefSeq) from Shewanella loihica PV-4

Subject, 294 a.a., formate dehydrogenase N subunit beta from Escherichia coli ECOR27

 Score =  101 bits (252), Expect = 1e-26
 Identities = 50/157 (31%), Positives = 79/157 (50%), Gaps = 19/157 (12%)

Query: 16  CVGCGACTVACQIHNELPE---------------NHRFRKVDRYEVKRDDGAIDVWL--S 58
           C+GC AC VAC   N++ +               + +   V R+     +G ++ WL   
Sbjct: 39  CIGCKACQVACSEWNDIRDEVGHCVGVYDNPADLSAKSWTVMRFSETEQNGKLE-WLIRK 97

Query: 59  HSCMHCENPACLMVCPAKAYHVR-DDGIVVLDREKCTGCGLCASACPYAAVSIREDDGKA 117
             CMHCE+P CL  CP+    ++  +GIV    E C GCG C + CP+    + ++D + 
Sbjct: 98  DGCMHCEDPGCLKACPSAGAIIQYANGIVDFQSENCIGCGYCIAGCPFNIPRLNKEDNRV 157

Query: 118 DKCNMCVELLDRGMKPACVSGCPVECLDVGNLQEVLK 154
            KC +CV+ +  G +PACV  CP   +  G  +E+L+
Sbjct: 158 YKCTLCVDRVSVGQEPACVKTCPTGAIHFGTKKEMLE 194



 Score = 36.6 bits (83), Expect = 4e-07
 Identities = 24/75 (32%), Positives = 31/75 (41%), Gaps = 23/75 (30%)

Query: 11  FRQENCVGCGACTVAC--QIHNELPENHRFRK----VDRYEVKRDDGAIDVWLSHSCMHC 64
           F+ ENC+GCG C   C   I     E++R  K    VDR  V ++               
Sbjct: 128 FQSENCIGCGYCIAGCPFNIPRLNKEDNRVYKCTLCVDRVSVGQE--------------- 172

Query: 65  ENPACLMVCPAKAYH 79
             PAC+  CP  A H
Sbjct: 173 --PACVKTCPTGAIH 185