Pairwise Alignments

Query, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 665 a.a., Methyl-accepting chemotaxis sensor/transducer protein from Pseudomonas sp. S08-1

 Score =  301 bits (772), Expect = 5e-86
 Identities = 201/542 (37%), Positives = 315/542 (58%), Gaps = 27/542 (4%)

Query: 110 TGDKWLNGKAIPGKYDPRTRPWYQQGKATT--QLDVTDIYIDDGSGHKVISILKNLG-DG 166
           T + + N  A P  Y+   +PW++ G+     +      Y DD S     +    +  DG
Sbjct: 130 TVNTYWNSDAAPAYYE---QPWHRAGQQAPAGKCAWAAAYKDDASAQPRTNCAMAIQKDG 186

Query: 167 VVLG----DIELTYLHDVVSAID--YPGAVALITDQTGKVLASES--------PTLVSGS 212
            + G    D+ L + +++V+  +    G V +I +  GK+L++++          +   +
Sbjct: 187 SLFGVSTIDVTLGFFNNLVAEKEKEIQGEV-MIVEPDGKILSNQARIGGEIVLKNVSELA 245

Query: 213 RFSDFGLPQVQQKI--IGSDEVMQEYRIDGVDKLGFSKAIPLVNGKQWFLFIGLDKSNAY 270
           R S F + ++Q+ +  +G  E + ++  D  D   ++  +  + G  W L   L      
Sbjct: 246 RQSVF-VGEIQEGLGKMGR-EALYKHEFDSPDGEAWTFYLQPIEGTPWLLAAALPTRLLT 303

Query: 271 AVVDQAL-TSALVSSAIMLLCAISILLGVLYLLYRPILSLKAMVTELSKGNGDLTKRLEI 329
               + L T A +   +++L   ++L  +  L+ R +  L+  +  LS G+ DLT+R+ +
Sbjct: 304 ENSSEVLSTLAYIQVPLVILLLATMLFAIRQLMQR-LHVLRGNIDSLSAGDADLTRRIAL 362

Query: 330 HCEDDLGQISMGINQFIANLQAMMREVLQASAHISGSVERLNGETETNRHILSAHTKETE 389
             ED++  +   +N+FIA LQ M+ +V QASA I+  + +L  ++     +L+ H  ET+
Sbjct: 363 KGEDEMDAVGDSVNRFIAYLQNMIADVTQASALIAEELAQLQQQSRHTNEVLTRHANETD 422

Query: 390 QIVAAVEEMSATANDVAQNGSETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTAD 449
           Q V A+ EMS+TA+ VAQ+ +ETA+FT+  N+ A  SKQVVA+A+ +V  LV EVE    
Sbjct: 423 QAVTAITEMSSTADTVAQSATETAAFTRNANDNAEQSKQVVAEASASVLALVGEVESATA 482

Query: 450 KIGQIDRDTINITQVLKVIGDIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAAR 509
           ++  + +D   I  VL VIG+IA QTNLLALNAAIEAARAGEQGRGFAVVADEVRALA R
Sbjct: 483 RVLAMQQDAQRINDVLGVIGEIAGQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAGR 542

Query: 510 TQDSTAEIEETLSNLRDASNSAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDL 569
           TQ ST+EI E L+ L+   +SA+ +ME TK +C  TA  T RV   LD + S+V++I+DL
Sbjct: 543 TQQSTSEINEMLAKLQQGVSSAVQAMEQTKASCQATADRTSRVNVGLDDMASAVSRIHDL 602

Query: 570 NTQIATAAEEQSSVSAEITRNMSAICDMANELARSGESSRNETVNLATANQQLEQIVGQF 629
           + QIATAAEEQS+V+ EI +NM AI  M ++L   G+ +   T  L  +N++L ++V +F
Sbjct: 603 SAQIATAAEEQSAVTEEINQNMVAIRHMVDDLVAGGQQADRSTDALLASNRRLVELVNRF 662

Query: 630 KL 631
           K+
Sbjct: 663 KV 664