Pairwise Alignments

Query, 632 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

Subject, 626 a.a., Methyl-accepting chemotaxis protein McpA from Pseudomonas sp. RS175

 Score =  256 bits (653), Expect = 3e-72
 Identities = 168/526 (31%), Positives = 291/526 (55%), Gaps = 28/526 (5%)

Query: 120 IPGKYDPRTRPWYQQGKATTQLDVTDIYIDDGSGHKVISIL--KNLGD--GVVLGDIELT 175
           +P  YDPR RPWY+Q  A  +  +T  Y+    G  V   L  K  G+  GVV GD+ L 
Sbjct: 115 MPDGYDPRQRPWYKQAVAADRTMLTPPYMAAVGGLVVTIALPVKRNGELLGVVGGDLSLE 174

Query: 176 YLHDVVSAIDYPG-AVALITDQTGKVLASESPTLVSGSRFSDF-GLPQVQQKIIGSDEVM 233
            L  +++++D+ G   A +    G+V+ S     V  +    + G P      +  ++ +
Sbjct: 175 TLVRIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTP------VRIEKGI 228

Query: 234 QEYRIDGVDK-LGFSKAIPLVNGKQWFLFIGLDKSNAYAVVDQALTSALVSSAIMLLCAI 292
           QE  ++G D+ L F++   L N  QW++ + +D+  AYA + Q  TSAL++  + +  AI
Sbjct: 229 QEVELNGQDRILSFTQVAGLPNA-QWYIGLSIDEDKAYAPLSQFRTSALIAMFVAV-AAI 286

Query: 293 SILLGVLY-LLYRPILSLKAMVTELSKGNGDLTKRLEIHCEDDLGQISMGINQFIANLQA 351
           ++LL +L  +L RP+ ++   + ++++G GDLT+RL +  +D+ G++    NQF+  + A
Sbjct: 287 ALLLSLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQSKDEFGELGSSFNQFVERIHA 346

Query: 352 MMREVLQASAHISGSVERLNGETETNRHILSA--HTKETEQIVAAVEEMSATANDVAQNG 409
            + EV  A+  +    +R+   T +N  I+ +   +  T  + AA+ ++ A   ++A+N 
Sbjct: 347 SIAEVSSATRQVHDLSQRVM--TSSNASIIGSDEQSARTNSVAAAINQLGAATQEIARNA 404

Query: 410 SETASFTQLTNEQALASKQVVAQATETVNRLVREVEHTADKIGQIDRDTINITQVLKVIG 469
           ++ +      +EQA   +QVV +  + ++ L  ++  +  +I  ++  T NI  +L VI 
Sbjct: 405 ADASQHASGASEQAEDGRQVVEKTIQAMSELSEKISLSCTQIETLNASTDNIGHILDVIK 464

Query: 470 DIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTAEIEETLSNLRDASN 529
            I+ QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RTQ+S  EI + +++L+  S 
Sbjct: 465 GISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSR 524

Query: 530 SAIHSMEVTKQTCLETASTTERVATDLDAIGSSVNQINDLNTQIATAAEEQSSVSAEITR 589
            A+ +M  ++ +  E+     +    L ++   + +I+ +N  +A A EEQS+V   +  
Sbjct: 525 EAVTTMNASQASSAESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQSAVVETLNM 584

Query: 590 NMSAICDMANELARSGESSRNETVN----LATANQQLEQIVGQFKL 631
           ++S I    N L +   ++ NET+     L+    +L+Q+V  FK+
Sbjct: 585 DVSQI----NLLNQQSVANLNETLKDCDALSQQANRLKQLVDSFKI 626