Pairwise Alignments

Query, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 300 a.a., Transcriptional regulator, LysR family from Variovorax sp. SCN45

 Score =  124 bits (311), Expect = 3e-33
 Identities = 91/286 (31%), Positives = 139/286 (48%), Gaps = 13/286 (4%)

Query: 16  QMLVFDEVVNQGSFTAAAEALGHTKSAVSQYVSQLEQDLGVKLLTRSTRQLHLTTQGEAM 75
           ++ +F +V   GSF  A +ALG   S VS+ V  +EQ LGV+L+ RSTR+L LT  G  +
Sbjct: 5   ELALFLQVARLGSFALAGKALGVPASTVSRQVKNIEQQLGVRLMQRSTRRLVLTEAGRLL 64

Query: 76  AQRSRQLWRLLTETLEAAHDQQAVPGGRMAITAPLAFEAPLLTPIIAELCGEFPQLLPEM 135
            QR    +  + +      D   V  G + I  P  F        + E     P++  E+
Sbjct: 65  VQRCETHFSAIGDVTREVLDGVGVVSGTLRIATPSDFFDWFPLSWLGEFRAMHPKVRLEI 124

Query: 136 HYDDARLDILQHNLDMAISVGPQKDSGYHAIPIGRLDSVLVAAPSYIN-RSAAITAESLR 194
              DA +D++   +D+A   G  + S   AI +      LVA+  Y++ R      E L 
Sbjct: 125 FAQDALVDVIGDGIDIAFRAGKLESSRLVAILLTTTSVFLVASAGYLSLRGTPRNPEDLA 184

Query: 195 GHSLIVL-----PWQRPLVLQGPSGLAFEAAKEIKVNTSISAI----NSAIAGVGIALVP 245
            H  + L       QR   + GP+G   E   E++   S SA+    ++A+ G+GIAL+P
Sbjct: 185 SHDGLTLRSSPSQSQRDWRVVGPAG---EVRLEVQSRFSASAMGLLRDAAVEGLGIALLP 241

Query: 246 SIFIETELAEGKLQRVLPEHSGPSREVFAIHAYQQQLPLALRLVVE 291
            + I +EL  G+LQRVLPE+  PS     ++  +QQ+  A    VE
Sbjct: 242 EVLIRSELDAGRLQRVLPEYGQPSVSFSLLYPSRQQIQKAASAFVE 287