Pairwise Alignments

Query, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 304 a.a., Transcriptional regulator, LysR family from Pseudomonas sp. S08-1

 Score =  133 bits (334), Expect = 6e-36
 Identities = 89/283 (31%), Positives = 143/283 (50%), Gaps = 2/283 (0%)

Query: 18  LVFDEVVNQGSFTAAAEALGHTKSAVSQYVSQLEQDLGVKLLTRSTRQLHLTTQGEAMAQ 77
           L+F  VV   SFT AA+ LG  KS VS+ ++ LE+ LGV+LL R+TR+L LT  G+A  +
Sbjct: 7   LIFTRVVECHSFTQAAQNLGMQKSTVSRRIALLEERLGVRLLNRTTRKLRLTEVGQAYYE 66

Query: 78  RSRQLWRLLTETLEAAHDQQAVPGGRMAITAPLAFEAPLLTPIIAELCGEFPQLLPEMHY 137
           R RQ+     E  +A    Q  P G + ITAP+ F    L  ++     ++PQ+  E+  
Sbjct: 67  RCRQIMLDFAEAEQAVMQLQQEPSGLLRITAPIEFGQLFLGGVLGRFMRQYPQISAEVEL 126

Query: 138 DDARLDILQHNLDMAISVGPQKDSGYHAIPIGRLDSVLVAAPSYI-NRSAAITAESLRGH 196
               +D L+  +D+AI VG  +DS   A  +      L A+P Y+    A  +   L GH
Sbjct: 127 TSRDVDPLEEGVDIAIQVGQPRDSTLIARKLLESPRRLCASPEYLAQHGAPRSIHELAGH 186

Query: 197 SLIVLPWQRPLVLQGPSGLAFEAAKEIKVNTSISAINSAIAGVGIALVPSIFIETELAEG 256
             I+LP   P       G   +  + +  N    A  +A+AG GI+ +P +  E  L  G
Sbjct: 187 RAILLPQDSPRYWP-LVGEQVQCQRVLSCNNITLAREAALAGAGISGLPVMISEEALRSG 245

Query: 257 KLQRVLPEHSGPSREVFAIHAYQQQLPLALRLVVERLKEAFRQ 299
           +L  +LP+   P  E++A++  ++   + ++  ++ L  +  Q
Sbjct: 246 RLVELLPDARLPIGELYAVYPSRRFQAMKVKTFLDFLMASLPQ 288