Pairwise Alignments

Query, 305 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 301 a.a., LysR family transcriptional regulator from Agrobacterium fabrum C58

 Score =  129 bits (324), Expect = 8e-35
 Identities = 90/294 (30%), Positives = 149/294 (50%), Gaps = 8/294 (2%)

Query: 14  AYQMLVFDEVVNQGSFTAAAEALGHTKSAVSQYVSQLEQDLGVKLLTRSTRQLHLTTQGE 73
           A +M +F  VV  G F+ AA A   T SAVS+ +++LE  LG +LL RSTRQL +T +G 
Sbjct: 9   AGEMEIFVRVVELGGFSRAAAAANMTPSAVSKLIARLESRLGARLLNRSTRQLQITPEGC 68

Query: 74  AMAQRSRQLWRLLTETLEAAHDQQAVPGGRMAITAPLAFEAPLLTPIIAELCGEFPQLLP 133
           A  +R+ ++   L E   AA +++  P GR+ I    ++   +L PI+       P++  
Sbjct: 69  AFYERATRILADLEEAERAAGERER-PIGRVRINTSASYATHILAPILPRFLALHPEITL 127

Query: 134 EMHYDDARLDILQHNLDMAISVGPQKDSGYHAIPIGRLDSVLVAAPSYINR-SAAITAES 192
           ++   D  +D+L   +D+A+  GP K S   A  +G    V+ AAP Y+ R     T   
Sbjct: 128 DIVQTDLVVDLLAERMDVAVRAGPLKSSSLVARKLGETRMVIAAAPDYLKRCGVPQTISD 187

Query: 193 LRGHSLIVLPWQRPL----VLQGPSGLAFEAAKEIKVNTSISAINSAIAGVGIALVPSIF 248
           L GH+ + L + R +    +  G   +   A   ++V+        A+AGVG+  + +  
Sbjct: 188 LEGHNCLALGYARSIDGWPLQDGGKTVVIPATGRVQVSDGEGLRRLALAGVGLVRLAAFT 247

Query: 249 IETELAEGKLQRVLPE-HSGPSREVFAIHAYQQ-QLPLALRLVVERLKEAFRQK 300
           I  ++A G+L  VL    +G +    A++  Q+  LP  +R +++ L E  R K
Sbjct: 248 IREDIAAGRLVSVLDHLDTGETETFHAVYVGQRGPLPSRIRALLDFLGEYGRVK 301