Pairwise Alignments

Query, 634 a.a., LppC family lipoprotein (RefSeq) from Shewanella loihica PV-4

Subject, 603 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score =  202 bits (514), Expect = 3e-56
 Identities = 165/639 (25%), Positives = 278/639 (43%), Gaps = 59/639 (9%)

Query: 9   KFISAAVLATVLFGCATAPTPVKETSTQVSLVNATQSP----AEYLADAKQASDAEQKNR 64
           + +SA  LA +L  CA++P+         SL +  ++P     + L  A  A   E+   
Sbjct: 6   RLLSALCLAALLAACASSPSS--------SLGDLPRTPDASIEQLLEQATTAKTPEKAAL 57

Query: 65  LMLLAAHAFINQGDTGNASKTLAAVKPSLVNKPEILAEHRYLSARVLEQTANYDQALAQL 124
           L L AA     Q + G +S+ LA V   ++ KP        L+A +         AL  L
Sbjct: 58  LRLSAADMAYKQNNPGRSSQILAQVSLDVL-KPAAQVFASTLAAELAMARNQPKAALTAL 116

Query: 125 NYPSKWRLANW---QMVSYHQLKARLFQLSKSPIEQAKELTLLATYLPSTEASEVNDEIW 181
           N+PS   L +    Q +    + AR ++     +  A+E   +A  L    A   ++ IW
Sbjct: 117 NHPSLQSLKDLPPEQQIRTASVHARAYEADGQTLAAARERVAMAPLLTGDAAKSNHEAIW 176

Query: 182 GILQPLHEQTLLAFSQDSSNPIFAGWLQLAYIAKHYAIDPQQLVQQLGNWQQDNPGHPGA 241
            ++  L  + L    Q S NP   GW+ LA   K      QQ    +  W+  NPGHP A
Sbjct: 177 VLIAALPAEQL----QASGNPTLDGWITLAQAVKGAGTLEQQQAA-IDTWRAQNPGHPAA 231

Query: 242 KKLPTDLERALNTKPYKPKKIAVLLPLTGPRAAIADTVKQGIISSYLTNPDDSVS---VN 298
            +LPT L +          KIA+LLP  GP A++   +++G ++++            + 
Sbjct: 232 VQLPTPLTKLKELASQPLTKIALLLPQDGPLASVGKALREGFMAAHYQAEQAGQKPPVIE 291

Query: 299 FFDTAQGAELAQ--QQAIAAGADFIIGPLLQSEVESLMQAEQKASQQANGQQQPGAQAQA 356
           F+D+++   L     +A AAG   ++GPL +  V+ L                       
Sbjct: 292 FYDSSRLTSLDDFYAKAQAAGVQLVVGPLEKPLVKQL----------------------- 328

Query: 357 QAQAQAQAQVQPKVPQLFLNHVDSFTPSNDQFFFALSPTDEAVDAAQKLYNDGIEKPLLL 416
                  A+ Q  +  L LN+ +S       F F L+  DEA + +++   DG+ +   +
Sbjct: 329 ------SARPQLPITTLALNYSESDRSPAQLFQFGLAAEDEAREVSRRARADGLHRAAAM 382

Query: 417 ASDDAVGRRMAEAFNGKWQELTHEAAEIHYYKRGDEMKVTVQKSLGVIDSKERIARIKTL 476
                 G R+ +AF   W+    +   + Y  +   +   +     +  S+ R   +++ 
Sbjct: 383 VPRGEWGERVYKAFRQDWEANGGQVMGVEYVDQPVALAQQIADLFQLRKSEGRAKSLQST 442

Query: 477 LGNKIEADFRSRRDIDAIYMIASSQDLPLLKPFIDVNFSVFAEPVPLYTTSRSRIESQSR 536
           +G  + A    R+DI+ I++  + Q    +KP +  NF  +A  VP+Y TS     S  +
Sbjct: 443 VGTDVAAQPSRRQDIEFIFLAVTPQLAQQIKPTL--NFQ-YAGDVPVYATSHVFSASGDK 499

Query: 537 TAAQELNNLTISDIPWLIETNAETA-EVARLWPTWGNSQKRLYVMGFDALQLVSKLAQMR 595
               ++ N+   + PWL+ T      +VA  WP    S  RLY MG DA +L  +L Q++
Sbjct: 500 NQYLDMTNVMFCETPWLLNTTDPLRNQVAAQWPQANGSLGRLYAMGVDAYRLAPRLGQLK 559

Query: 596 ALPGYQYSGRSGLLSVSPDGTINRQLSWGRYQRGNLRPL 634
           ALP  +  G SG L +S    ++RQ+ W ++  G ++ L
Sbjct: 560 ALPDTRVDGLSGSLGISTTQRVDRQMPWAKFVGGEIQRL 598