Pairwise Alignments

Query, 634 a.a., LppC family lipoprotein (RefSeq) from Shewanella loihica PV-4

Subject, 678 a.a., penicillin-binding protein activator LpoA from Escherichia coli ECRC62

 Score =  183 bits (465), Expect = 2e-50
 Identities = 182/683 (26%), Positives = 280/683 (40%), Gaps = 67/683 (9%)

Query: 4   RLNTTKFISAAVLATVLFGCATAPTPVKETSTQVSLVNATQSPAEYLADAKQASDAEQKN 63
           RL   + +   + A +  GC T  TP  + ST      A    A YL   +Q+SD  + N
Sbjct: 8   RLKAARCLPVVLAALIFAGCGTH-TP--DQSTAYMQGTAQADSAFYLQQMQQSSDDTRIN 64

Query: 64  RLMLLAAHAFINQGDTGNASKTLAAVKPSLVNKPEILAEHRYLSARVLEQTANYDQALAQ 123
              LLA  A + +G TG A +    +   L +      E   L+  +     ++  A   
Sbjct: 65  -WQLLAIRALVKEGKTGQAVELFNQLPQELNDSQR--REKTLLAVEIKLAQKDFAGAQNL 121

Query: 124 LNYPSKWRLANWQMVSYHQLKARLFQLSKSPIEQAKELTLLATYLPSTEASEVNDEIWGI 183
           L   +   L   Q   Y Q K    Q  +  I+  + L      L + E  +  D  W  
Sbjct: 122 LAKITPADLEQNQQARYWQAKIDASQ-GRPSIDLLRALIAQEPLLGAKEKQQNIDATWQA 180

Query: 184 LQPLHEQTLLAFSQDSSNPIFAGWLQLAYIAKHYAIDPQQLVQQLGNWQQDNPGHPGAKK 243
           L  + ++       ++   I  GWL L  +      DP  +   + +WQ+  P +PGAK 
Sbjct: 181 LSSMTQEQANTLVINADENILQGWLDLQRVWFDNRNDPDMMKAGIADWQKRYPNNPGAKM 240

Query: 244 LPTDLERALNTKPYKPKKIAVLLPLTGPRAAIADTVKQGI-ISSYLTNPDDSVSVNFFDT 302
           LPT L      KP    KIA+LLPL G  A    T++QG   +  +     +  V     
Sbjct: 241 LPTQLVNVKAFKPASTNKIALLLPLNGQAAVFGRTIQQGFEAAKNIGTQPVAAQVAAAPA 300

Query: 303 AQGAELAQQQAIAAGADFIIGPLLQSEVESLMQAEQKASQQA------------NGQQQP 350
           A  AE  Q Q +    D +  P  Q+ V  L   EQ A+Q A            +    P
Sbjct: 301 ADVAEQPQPQTV----DGVASP-AQASVSDL-TGEQPAAQPAPVSTPAATTTAVSAPANP 354

Query: 351 GAQ-----AQAQAQAQAQAQVQPK-----VPQLFLNHVDSFTPSNDQF------------ 388
            A+       +Q  +Q  +QVQ       V  L  N+V+    SN               
Sbjct: 355 SAELKIYDTSSQPLSQILSQVQQDGASIVVGPLLKNNVEELLKSNTPLNVLALNQPENIE 414

Query: 389 ------FFALSPTDEAVDAAQKLYNDGIEKPLLLASDDAVGRRMAEAFNGKWQELTHEAA 442
                 +FALSP DEA DAA+ + + G + PL+L    ++G R+A AF  +WQ+L     
Sbjct: 415 NRVNICYFALSPEDEARDAARHIRDQGKQAPLVLIPRSSLGDRVANAFAQEWQKLGGGTV 474

Query: 443 EIHYYKRGDEMKVTVQKSLGVIDSKERI-----------ARIKTLLGNKIEADFRSRRD- 490
               +    E++  V    G+  +   I               TL     +  F +    
Sbjct: 475 LQQKFGSTSELRAGVNGGSGIALTGTPITPRATTDSGMTTNNPTLQTTPTDDQFTNNGGR 534

Query: 491 IDAIYMIASSQDLPLLKPFIDVNFSVFAEPVPLYTTSRSRIESQSRTAAQELNNLTISDI 550
           +DA+Y++A+  ++  +KP I +  +       LY +SRS   +       E+  L  S+I
Sbjct: 535 VDAVYIVATPGEIAFIKPMIAMR-NGSQSGAMLYASSRSAQGTAGPDFRLEMEGLQYSEI 593

Query: 551 PWLIETNAETAEVARLWPTWGNSQKRLYVMGFDALQLVSKLAQMRALPGYQYSGRSGLLS 610
           P L   N    + A        S  R+Y MG DA  L +  +QMR + G++ +G +G L+
Sbjct: 594 PMLAGGNLPLMQQALSAVNNDYSLARMYAMGVDAWSLANHFSQMRQVQGFEINGNTGSLT 653

Query: 611 VSPDGTINRQLSWGRYQRGNLRP 633
            +PD  INR+LSW +YQ+G + P
Sbjct: 654 ANPDCVINRKLSWLQYQQGQVVP 676