Pairwise Alignments

Query, 291 a.a., LysR family transcriptional regulator (RefSeq) from Shewanella loihica PV-4

Subject, 308 a.a., transcriptional regulator GcvA from Dickeya dadantii 3937

 Score =  177 bits (449), Expect = 3e-49
 Identities = 111/293 (37%), Positives = 163/293 (55%), Gaps = 14/293 (4%)

Query: 2   RKIPPLRALQVFEAAARLQHFSRAAQELCITQSAVSHQVRLLEEHFALPLFRREGRSLRL 61
           +++PPL AL+VF+AAAR   F+RAA+EL +TQ+AVSHQ++ LE+   L LFRR  RSL L
Sbjct: 3   KRLPPLNALRVFDAAARHLSFTRAAEELFVTQAAVSHQIKSLEDFLGLKLFRRRNRSLLL 62

Query: 62  TDKGEQLFQETARIFNELGELNLRLLGEKPE-ALRLAVYSSFAVKWLIPRLSGFRRLHPG 120
           T++G+  F +   IF+ L E   +L     + AL +++  SFA+ WL+PRLS F   +PG
Sbjct: 63  TEEGQSYFLDIKEIFSALNEATRKLQARSAKGALTVSLLPSFAIHWLVPRLSSFNSDYPG 122

Query: 121 IQVRLDMITEDPVLSHSSADMFI-TGQQDQKGYWQQLLHAERLIPVCSPELISSSDKL-- 177
           I VR+  +  +        D+ I  G+ +  G   + L+AE L+PVCSP+L++    L  
Sbjct: 123 IDVRIQAVDREEERLSDDVDVAIFYGRGNWPGLRVEKLYAEYLLPVCSPQLLAGEHPLKT 182

Query: 178 --DLDWLSTQQLLTVDEGPLGLDWQRWFEHHRVAQPEEEQQQLFSHVLMAIEAAIAGQGV 235
             DL W       T+       DW  +     + Q   +Q  +FSH  M ++AAI GQGV
Sbjct: 183 PGDLVW------HTLLHDASRRDWMAYTRQLGITQINVQQGPIFSHSAMVLQAAIHGQGV 236

Query: 236 ALASDFMVLDDIAKQRLVALPFAGIDTGFE-FNFLCKQRRLQEPAIAAFVHWL 287
           ALA++ M   +I   RLV  PF  +      F  +C   + +   IAAF  W+
Sbjct: 237 ALANNVMAQTEIEAGRLVC-PFNDVLVSKNAFYLVCHDSQAELGKIAAFRQWI 288