Pairwise Alignments

Query, 683 a.a., type IV pilus secretin PilQ (RefSeq) from Shewanella loihica PV-4

Subject, 584 a.a., Type II secretion pathway protein XcpQ from Pseudomonas putida KT2440

 Score =  125 bits (313), Expect = 7e-33
 Identities = 87/314 (27%), Positives = 159/314 (50%), Gaps = 31/314 (9%)

Query: 386 KGDDASLLSARGTVAV----DDRTNTLLVKDTEESLENIHRLVEVLDIPIRQVLIESRMV 441
           +G D  ++ A G   +    ++ TN +++   +  L     +VE LDI   QV++E+ + 
Sbjct: 236 EGKDRPVVPAAGGSGIRLEYEEGTNAVVMVGPDSELAAYRAIVEQLDIRRAQVVVEAIIA 295

Query: 442 TVKDDVSEDLGIKWGITDQQ--------GSKGTS-GSLEGANDIANGVVPDIGDRLNVNL 492
            V D  +++LG++W   D++        GS G +  S+ GA   A+G    +GD L+   
Sbjct: 296 EVSDSSAQELGVQWLFADEKFGAGIVNFGSNGVNIASIAGA--AASGDNEALGDLLSTTT 353

Query: 493 PAAVANPTSIAFHVAKLADGTLLDLELSALEQESKGEIIASPRITTSNQKAAYIEQGVEI 552
            A           +     G    + ++AL+ +S   ++++P + T +   A I  G E+
Sbjct: 354 GATAG--------IGHFGGGFNFAMLVNALKGKSGFNLLSTPTLLTLDNAEASILVGQEV 405

Query: 553 PYV-----ESASSGAATVQFKKAVLSLRVTPQITPDNRVILDLEITQDSQGKTVDTPLGQ 607
           P+V     ++ ++   T++ K+  + LR+ PQI  DN V LD+     S     DT    
Sbjct: 406 PFVTGSVTQNNANPYQTIERKEVGVKLRIKPQINIDNSVRLDIVQEVSS---IADTSSAS 462

Query: 608 AVSIDTQRIGTQVLVDHGETIVLGGIYQQQLINRVSKVPVLGDIPFLGYLFRNTTDKNER 667
            V  + + I T+V+V+    ++LGG+   +L     +VP+LGDIP+LG LFR+   +N +
Sbjct: 463 DVITNKREIKTKVMVEDNGLVILGGLISDELSTSDQRVPLLGDIPYLGRLFRSDATRNTK 522

Query: 668 QELLIFVTPKIISE 681
           Q L++F+ P+I+ +
Sbjct: 523 QNLMVFIRPRILRD 536