Pairwise Alignments

Query, 446 a.a., preprotein translocase subunit SecY (RefSeq) from Shewanella loihica PV-4

Subject, 443 a.a., Sec Translocation Complex - SecY subunit from Pseudomonas putida KT2440

 Score =  597 bits (1538), Expect = e-175
 Identities = 293/435 (67%), Positives = 361/435 (82%), Gaps = 2/435 (0%)

Query: 1   MAKPGLDLKSAKGGLSELKARLLFVIGAIIVFRAGSFVPIPGIDAAVLAELFNQQKGTIL 60
           MAK G      KGG+SEL ARL F+  AIIV+R G+ +P+PGI+   LA+LF Q +GTIL
Sbjct: 1   MAKQGALSSLGKGGMSELWARLRFLFMAIIVYRIGAHIPVPGINPDRLADLFRQNEGTIL 60

Query: 61  GMFNMFSGGALERASIFALGIMPYISASIIMQLLTVVHPALAELKKEGESGRKKISQYTR 120
            +FNMFSGGALER SIFALGIMPYISASIIMQL+T V P L +LKKEGE+GR+KISQYTR
Sbjct: 61  SLFNMFSGGALERMSIFALGIMPYISASIIMQLMTAVSPQLEQLKKEGEAGRRKISQYTR 120

Query: 121 YGTLVLGTFQAIGIATGLPNLVPGLVVNLGFGFYFVAVVSLVTGTMFLMWLGEQITERGI 180
           YGT++L   QAIG++ GL N   G+  ++G GF+ VAV + V G MF+MWLGEQITERG+
Sbjct: 121 YGTVILALVQAIGMSIGLAN--QGVAFSVGLGFHIVAVSTFVAGAMFMMWLGEQITERGV 178

Query: 181 GNGISILIFAGIVAGLPSAIGQTAEQARQGDLNVLVLLLIAVIVFAVTYFVVFVERGQRR 240
           GNGIS+LIFAGIVAGLP AIGQ+ E AR GD+N+  L+ I ++  A+  FVVF+ERGQRR
Sbjct: 179 GNGISMLIFAGIVAGLPRAIGQSFESARTGDINIFALVAIGLLAVAIIGFVVFIERGQRR 238

Query: 241 IVVNYAKRQQGRKVFAAQSTHLPLKVNMAGVIPPIFASSIILFPGTLAQWFGQNEGLSWL 300
           I V+YAKRQQGRKVFAAQ++HLPLKVNMAGVIP IFASSI+LFP +L  WFGQ+EG+ WL
Sbjct: 239 IAVHYAKRQQGRKVFAAQTSHLPLKVNMAGVIPAIFASSILLFPASLGAWFGQSEGMGWL 298

Query: 301 SDFSLAVSPGQPLYSLLYATAIIFFCFFYTALVFNPRETADNLKKSGAFIPGIRPGEQTS 360
            D S +++PGQPL  LL++  IIFFCFFYTAL+FNP++ A+NLKKSGAFIPGIRPGEQ++
Sbjct: 299 QDISQSIAPGQPLNILLFSAGIIFFCFFYTALMFNPKDVAENLKKSGAFIPGIRPGEQSA 358

Query: 361 RYIDKVMTRLTLAGALYITFICLIPEFMLIAWKVQFYFGGTSLLIMVVVIMDFMAQVQTH 420
           RYID V+TRLT+ GALY+  +CL+P+F+++A  V FY GGTSLLI+VVV+MDFM+QVQ+H
Sbjct: 359 RYIDGVLTRLTMFGALYMMAVCLLPQFLVVAANVPFYLGGTSLLIVVVVVMDFMSQVQSH 418

Query: 421 MMSHQYESVMKKANL 435
           ++SHQYES+MKKANL
Sbjct: 419 LVSHQYESLMKKANL 433