Pairwise Alignments

Query, 275 a.a., 50S ribosomal protein L2 (RefSeq) from Shewanella loihica PV-4

Subject, 274 a.a., 50S ribosomal protein L2 from Pseudomonas simiae WCS417

 Score =  444 bits (1143), Expect = e-130
 Identities = 215/273 (78%), Positives = 237/273 (86%), Gaps = 1/273 (0%)

Query: 1   MAVIKCKPTSAGRRHVVKVVNSDLHKGKPFAGLLAKKAKSGGRNNTGRITVRHVGGGHKQ 60
           MA++KCKPTS GRR VVKVVN +LHKG P A LL KK+KSGGRNN GRIT RH+GGGHKQ
Sbjct: 1   MAIVKCKPTSPGRRFVVKVVNQELHKGAPHAPLLEKKSKSGGRNNNGRITTRHIGGGHKQ 60

Query: 61  HYRIVDFKRN-KDGIPAKVERLEYDPNRTANIALVLYADGERRYILAAKGMQAGDQIQSG 119
           HYR+VDF+RN KDGI A VER+EYDPNRTA+IAL+LYADGERRYI+A KG+ AGDQ+ +G
Sbjct: 61  HYRLVDFRRNDKDGIAATVERIEYDPNRTAHIALLLYADGERRYIIAPKGVSAGDQLIAG 120

Query: 120 IDAEIKAGNALPLRNIPVGSVVHAVEMKPGKGAQIARSAGTYVQVVARDGAYATLRLRSG 179
             A IK GNAL LRNIPVGS VH +E+KPGKGAQIARSAG   Q++AR+G Y TLRLRSG
Sbjct: 121 ALAPIKPGNALQLRNIPVGSTVHGIELKPGKGAQIARSAGASAQLIAREGVYVTLRLRSG 180

Query: 180 EMRKVPVDCRATLGEVGNAEHMLRQLGKAGAKRWRGVRPTVRGVAMNPVDHPHGGGEGRT 239
           EMRKV  +CRATLGEV N+EH LR LGKAGAKRWRGVRPTVRGVAMNPVDHPHGGGEGRT
Sbjct: 181 EMRKVLAECRATLGEVSNSEHSLRSLGKAGAKRWRGVRPTVRGVAMNPVDHPHGGGEGRT 240

Query: 240 SGGRHPVTPWGVPTKGYKTRSNKRTDKYIVRRR 272
           SGGRHPV+PWG PTKG KTR NKRTDK IVRRR
Sbjct: 241 SGGRHPVSPWGFPTKGAKTRGNKRTDKMIVRRR 273