Pairwise Alignments

Query, 180 a.a., NusG antitermination factor (RefSeq) from Shewanella loihica PV-4

Subject, 177 a.a., transcription antitermination protein nusG from Kangiella aquimarina DSM 16071

 Score =  265 bits (677), Expect = 3e-76
 Identities = 125/173 (72%), Positives = 154/173 (89%)

Query: 7   RWYVVQAFSGYEGRVCKSLLEHIKMHGMEHYFGEVLVPTEEVVEMRAGQRRKSERKFFPG 66
           RWYVVQAFSGYE +V   L E I++ G+E  FGE+LVPTEEVVEMRAGQ+R+SERKFFPG
Sbjct: 4   RWYVVQAFSGYENKVKTMLEERIQLSGLEDKFGEILVPTEEVVEMRAGQKRRSERKFFPG 63

Query: 67  YVLVQMEMNDESWHLVKSIPRVMGFIGGTSDRPAPISDREADAILQRLQETTESPTHRVM 126
           YVLVQMEM++ESW +V++ PRVMGFIGGTSDRPAPIS++EA+AIL R++++ + P  +V+
Sbjct: 64  YVLVQMEMDEESWQVVRNTPRVMGFIGGTSDRPAPISEKEANAILNRIEDSGDKPKPKVL 123

Query: 127 FEPGEVVRVTDGPFADFNGTVEEVDYEKNRVKVSVMIFGRSTPVELDFSQIEK 179
           FEPGE+VRVTDGPFADFNG VE V+YEK+R++VSV IFGRSTPVEL+FSQ+EK
Sbjct: 124 FEPGEMVRVTDGPFADFNGVVESVNYEKSRLQVSVSIFGRSTPVELEFSQVEK 176