Pairwise Alignments

Query, 180 a.a., NusG antitermination factor (RefSeq) from Shewanella loihica PV-4

Subject, 191 a.a., transcription termination/antitermination protein NusG from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  192 bits (487), Expect = 4e-54
 Identities = 89/176 (50%), Positives = 129/176 (73%), Gaps = 1/176 (0%)

Query: 5   KKRWYVVQAFSGYEGRVCKSLLEHIKMHGMEHYFGEVLVPTEEVVEMRAGQRRKSERKFF 64
           + +WY+V A+S +E +V + L +  K  G+E  F E+LVPTE+VVE+R G++  SERKFF
Sbjct: 13  RHKWYIVNAYSNFEKKVAEQLRDQAKQQGLEDAFSEILVPTEDVVEIRRGRKVNSERKFF 72

Query: 65  PGYVLVQMEMNDESWHLVKSIPRVMGFIGGT-SDRPAPISDREADAILQRLQETTESPTH 123
           PGYVLV+MEM D+++HLVK+ P+V GF+G     +P P+S+RE   I+  ++E  E P  
Sbjct: 73  PGYVLVKMEMTDQAYHLVKNTPKVTGFLGAAGGTKPLPVSEREVQNIIGAVEEGVERPKP 132

Query: 124 RVMFEPGEVVRVTDGPFADFNGTVEEVDYEKNRVKVSVMIFGRSTPVELDFSQIEK 179
            + F+ GE V+V DGPFA F+G+VE VD E  R++V+V IFGR+TPVEL+++Q+EK
Sbjct: 133 TIRFDIGEKVKVIDGPFASFDGSVESVDEEHARLRVAVSIFGRATPVELEYAQVEK 188