Pairwise Alignments

Query, 239 a.a., DNA polymerase III subunit epsilon (RefSeq) from Shewanella loihica PV-4

Subject, 235 a.a., DNA polymerase III subunit epsilon from Pseudomonas simiae WCS417

 Score = 48.9 bits (115), Expect = 9e-11
 Identities = 47/209 (22%), Positives = 85/209 (40%), Gaps = 12/209 (5%)

Query: 12  DWPGKFEQRLKTTEHQGLRQYYLGGLPDPDTPLAEVELLAMDFETTGLNVDKDDIVSIGT 71
           +W  K +  L + + Q L Q      P  +  L     + +D ET+GLN+++D ++SIG 
Sbjct: 5   NWLRKKKPGLDSAQQQRLAQLR-SPTPLGNNTLRNQRWVVVDLETSGLNLNRDQVLSIGA 63

Query: 72  VPFTLRRIFLNRAQHWTVRPREQLAEESVIIHGITHSDILDAPDLSAIFEQVLEQMAGKI 131
           V      +  ++    T++  E     SV+IHG+  S I    D        ++ +    
Sbjct: 64  VVIEDGAVDFSQLFERTLQRAETKLSPSVLIHGLGPSAIAAGSDPVDALLDFMDFVGDSP 123

Query: 132 MVVHYQAIERLFLERALIRRIHQGIEFPLIDTMALESEIQKRQHGGLLQRLKGDKPGSVR 191
           ++  +   ++  L RAL   +   +  P +D   +   +    H                
Sbjct: 124 LLAFHAPFDQHMLCRALKDSLGYRLTHPFLDVADIAPLLCPEAH-----------IREAG 172

Query: 192 LGQSRSRYGLPSYPPHNALTDAIATAELL 220
           L    + + L     H+A  DA+ATAEL+
Sbjct: 173 LDDWINHFNLHVGERHHASADALATAELM 201