Pairwise Alignments

Query, 239 a.a., DNA polymerase III subunit epsilon (RefSeq) from Shewanella loihica PV-4

Subject, 242 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 3e-10
 Identities = 48/174 (27%), Positives = 72/174 (41%), Gaps = 15/174 (8%)

Query: 52  MDFETTGLNVDKDD------IVSIGTVPFTLRRIFLNRAQHWTVRPREQLAEESVIIHGI 105
           +D ETTG+N           I+ IG V    R++   R  H  + P + + EE++ +HGI
Sbjct: 13  LDTETTGMNQGAGAVYFGHRIIEIGCVEVINRKL-TGRHFHEYINPMQAIDEEAITVHGI 71

Query: 106 THSDILDAPDLSAIFEQVLEQMAGKIMVVHYQAIERLFLERALIRRIHQGIEFPLIDTMA 165
           T+  + D P  + I    LE + G  +V H    +  F++        +G +   I  + 
Sbjct: 72  TNEFVADKPVFAQIAPAFLEFIDGAEIVAHNANFDVSFMDHEFSLLTPRGPKTTDICQVL 131

Query: 166 LESEIQKRQHGGLLQRLKGDKPGSVRLGQSRSRYGLPSYPPHNALTDAIATAEL 219
              EI K  H G    L        R G   SR  L     H AL DA   A++
Sbjct: 132 DSLEIAKFLHPGQKNNLDA---LCKRYGIDNSRREL-----HGALLDAEILADV 177