Pairwise Alignments

Query, 366 a.a., DNA polymerase III, beta subunit (RefSeq) from Shewanella loihica PV-4

Subject, 372 a.a., DNA polymerase III subunit beta from Rhizobium sp. OAE497

 Score =  265 bits (676), Expect = 2e-75
 Identities = 153/373 (41%), Positives = 223/373 (59%), Gaps = 8/373 (2%)

Query: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60
           M+ +I+R  LLK L  V   VERR+ +PIL+N+L+   G +L +  TDL++E V +A   
Sbjct: 1   MRITIERSNLLKSLNHVHRVVERRNTIPILSNILLRADGQNLDMKATDLDLE-VTEATPA 59

Query: 61  GEVQEGRTTVPAKKFLDIVKSLPD--QVELKIEQQDNRLLLRSGRSRFTLATLPAEEYPN 118
              Q G TTVPA    DIV+ LPD  +V L        + ++SGRS+F+L  LP  ++P+
Sbjct: 60  NVEQAGATTVPAHLLYDIVRKLPDGSEVLLATSTDGGSMTVQSGRSKFSLQCLPQSDFPD 119

Query: 119 VDAFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLL---LETEGNV-LRAIATDG 174
           + A      F LK   LK LID TQF+++ ++ RYYLNG+    +E+EG++ LRA+ATDG
Sbjct: 120 LTAGTFTHSFKLKATDLKMLIDRTQFAISTEETRYYLNGIFFHTIESEGDLKLRAVATDG 179

Query: 175 HRLALSH-RMVQDSLPEKQVIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFT 233
           HRLA +  +    S     +I+PRK V ELQ+L +  +  VT+ + +  IR +  S V T
Sbjct: 180 HRLARADVKAPSGSEGMPGIIIPRKTVGELQKLVDNPEAMVTVEVSDAKIRLSIGSIVMT 239

Query: 234 SKLVDGRFPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKIT 293
           SKL+DG FPDY+RV+P G DK +        QA+ R S +S+E+ R V++ L +  + +T
Sbjct: 240 SKLIDGTFPDYQRVIPTGNDKEMRVDCTTFAQAVDRVSTISSERGRAVKLALSEGQLLLT 299

Query: 294 ANNPEQEEAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHV 353
            NNP+   A E + + YD   +EIGFN  YLLD+   L  D     L D  S  LI +  
Sbjct: 300 VNNPDSGSATEEVAVGYDTDAMEIGFNAKYLLDITAQLSGDQAVFLLADAGSPTLIRDTA 359

Query: 354 EEDSMYVVMPMRL 366
            +D++YV+MPMR+
Sbjct: 360 GDDALYVLMPMRV 372