Pairwise Alignments

Query, 366 a.a., DNA polymerase III, beta subunit (RefSeq) from Shewanella loihica PV-4

Subject, 367 a.a., Beta sliding clamp from Pseudomonas sp. DMC3

 Score =  405 bits (1042), Expect = e-118
 Identities = 205/367 (55%), Positives = 270/367 (73%), Gaps = 1/367 (0%)

Query: 1   MKFSIDRDALLKPLQLVSGAVERRHNLPILANLLVEVSGHSLKLTGTDLEVELVGQAELQ 60
           M F+I R+ALLKPLQLV+G VERR  LP+L+N+L+ V G  L LTGTDLEVELVG+ +L+
Sbjct: 1   MHFTIQREALLKPLQLVAGVVERRQTLPVLSNVLLVVEGQQLSLTGTDLEVELVGRVQLE 60

Query: 61  GEVQEGRTTVPAKKFLDIVKSLPDQVELKIEQQDNRLLLRSGRSRFTLATLPAEEYPNVD 120
              + G  TVPA+K +DI KSLP+   + I+  + +L++++GRSRFTL+TLPA ++P V+
Sbjct: 61  EPAETGSITVPARKLMDICKSLPNDALIDIKVDEQKLVVKAGRSRFTLSTLPANDFPTVE 120

Query: 121 AFQADIEFTLKQGTLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS 180
                +  +L+Q  L+ LI+ T F+MA QDVRYYLNG+LLE    V+RA+ATDGHRLA+ 
Sbjct: 121 EGPGSLTCSLEQSKLRRLIERTSFAMAQQDVRYYLNGMLLEVSAGVIRAVATDGHRLAMC 180

Query: 181 HRMVQDSLPEK-QVIVPRKGVLELQRLFEGEDLDVTLSIGENAIRATTQSAVFTSKLVDG 239
                   P++ QVIVPRKG+LEL RL    D +V++ +G++ IRATT    FTSKLVDG
Sbjct: 181 SMQADIGQPDRHQVIVPRKGILELARLLTEPDGNVSIVLGQHHIRATTGEFTFTSKLVDG 240

Query: 240 RFPDYRRVLPKGGDKIVIASRNHLKQALLRASILSNEKFRGVRVQLEQNLIKITANNPEQ 299
           +FPDY RVLPKGGDK+V+  R  L++A  R +ILSNEK+RG+R+QL    +KI ANNPEQ
Sbjct: 241 KFPDYERVLPKGGDKLVLGDRQALREAFSRTAILSNEKYRGIRLQLASGQLKIQANNPEQ 300

Query: 300 EEAEEILDIEYDNAPLEIGFNVSYLLDVLNNLPSDDVRITLIDGNSSALIENHVEEDSMY 359
           EEAEE + +EY+   LEIGFNVSYLLDVL  + ++ VR+ L D NSSAL++    +DS Y
Sbjct: 301 EEAEEEVGVEYNGGSLEIGFNVSYLLDVLGVMTTEQVRLILSDSNSSALVQESDNDDSAY 360

Query: 360 VVMPMRL 366
           VVMPMRL
Sbjct: 361 VVMPMRL 367