Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 473 a.a., Chromosomal replication initiator protein DnaA from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  432 bits (1111), Expect = e-125
 Identities = 219/458 (47%), Positives = 306/458 (66%), Gaps = 12/458 (2%)

Query: 5   LWQQCIGRLQDELSAQQFSMWIRPLQAEM--DGETLVLYAPNRFVLDWVRDKYLNTINQF 62
           LW  C+ RL  E+  QQF+ WIRPL A +  DG  + +   NRF +DW+R +Y + I+  
Sbjct: 21  LWSACMDRLSQEIPEQQFNTWIRPLTATVAPDGSRVTVAVANRFKMDWIRAQYASRISAL 80

Query: 63  FTEQMGSDAPKLRFDIGSRPASKPAAPAASTKSPVAPAAK---SPSKPSFNSNEPAATAN 119
                G     L   +  R       P   T      A     +P++ +  +N P     
Sbjct: 81  LESVQGVPVA-LELVLAPREIPSRTMPVPRTVQDQVLAELPDLAPAEVAIPTNGP----- 134

Query: 120 HRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGLGKTHLLHAVGN 179
            ++ +NP   F   VEG +N++ +AAA+ V+ + G  YNPLF+YGG GLGKTHL+HA+GN
Sbjct: 135 -KTRLNPALTFSTLVEGSANRMARAAAMHVAGSLGQLYNPLFIYGGVGLGKTHLVHAIGN 193

Query: 180 GIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDDIQFFANKDRSQ 239
            ++ + P AKV+Y+H+E+FV D+VK+ Q    +EFK  Y S+D L IDD+QFFANK+R+Q
Sbjct: 194 HLLADRPQAKVLYIHAEQFVSDVVKSYQRKTFDEFKERYHSLDLLLIDDVQFFANKERTQ 253

Query: 240 EEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEPPELETRVAILM 299
           EEFF+ F ALL     ++LTSD YPK +  + +RL SRF  GLTVAIEPPELE RVAIL+
Sbjct: 254 EEFFNAFEALLAKKSHIVLTSDTYPKGLADIHERLVSRFDSGLTVAIEPPELEMRVAILI 313

Query: 300 RKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITIDFVREALRDLL 359
            KA      +P+EVAFF+AK +RSNVRELEGAL +++A + F  + I+I   R+AL+DLL
Sbjct: 314 NKAAVENAVMPEEVAFFVAKNVRSNVRELEGALRKILAYSRFNQKEISIQLARDALKDLL 373

Query: 360 ALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKELTNQSLPEIGD 419
           ++Q + ++++NIQKTVA++YKIK+ADM SK+R  S+ARPRQ+AM ++KELT +SLPEIG+
Sbjct: 374 SIQNRQISVENIQKTVADFYKIKVADMYSKKRPASIARPRQIAMFIAKELTQKSLPEIGE 433

Query: 420 AFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTL 457
            FGGRDHTTVLHA RKI   R+++ ++ +    L +TL
Sbjct: 434 LFGGRDHTTVLHAVRKIGAERQQNSELNQQLHVLEQTL 471