Pairwise Alignments

Query, 459 a.a., chromosomal replication initiation protein (RefSeq) from Shewanella loihica PV-4

Subject, 466 a.a., Chromosomal replication initiator protein DnaA from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  728 bits (1878), Expect = 0.0
 Identities = 375/471 (79%), Positives = 409/471 (86%), Gaps = 17/471 (3%)

Query: 1   MAVSLWQQCIGRLQDELSAQQFSMWIRPLQAEMDGETLVLYAPNRFVLDWVRDKYLNTIN 60
           +++SLWQQC+ RLQDEL A +FSMWIRPLQAE+   TL LYAPNRFVLDWVRDKYLN IN
Sbjct: 1   VSLSLWQQCLARLQDELPATEFSMWIRPLQAELSDNTLALYAPNRFVLDWVRDKYLNNIN 60

Query: 61  QFFTEQMGSDAPKLRFDIGSRPASKP--------AAPAASTKSP---VAPAAKSPSKPSF 109
                  G+DAP+LRF++G++P ++          APA +T +    VAPAA+S      
Sbjct: 61  GLLNTFCGADAPQLRFEVGTKPVTQTLKTPVHNVVAPAQTTTAQPQRVAPAARSGW---- 116

Query: 110 NSNEPA-ATANHRSNMNPTYQFDNFVEGKSNQLGKAAALQVSENPGGAYNPLFLYGGTGL 168
             N PA A   +RSN+N  + FDNFVEGKSNQL +AAA QV++NPGGAYNPLFLYGGTGL
Sbjct: 117 -DNVPAPAEPTYRSNVNVKHTFDNFVEGKSNQLARAAARQVADNPGGAYNPLFLYGGTGL 175

Query: 169 GKTHLLHAVGNGIIKNNPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALFIDD 228
           GKTHLLHAVGNGI+   PNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDAL IDD
Sbjct: 176 GKTHLLHAVGNGIMARKPNAKVVYMHSERFVQDMVKALQNNAIEEFKRYYRSVDALLIDD 235

Query: 229 IQFFANKDRSQEEFFHTFNALLEGNHQVILTSDRYPKEIDGVEDRLKSRFGWGLTVAIEP 288
           IQFFANK+RSQEEFFHTFNALLEGN Q+ILTSDRYPKEI+GVEDRLKSRFGWGLTVAIEP
Sbjct: 236 IQFFANKERSQEEFFHTFNALLEGNQQIILTSDRYPKEINGVEDRLKSRFGWGLTVAIEP 295

Query: 289 PELETRVAILMRKAQESGINLPDEVAFFIAKRLRSNVRELEGALNRVIANANFTGRPITI 348
           PELETRVAILM+KA E+ I LP EVAFFIAKRLRSNVRELEGALNRVIANANFTGR ITI
Sbjct: 296 PELETRVAILMKKADENDIRLPGEVAFFIAKRLRSNVRELEGALNRVIANANFTGRAITI 355

Query: 349 DFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKMADMLSKRRSRSVARPRQMAMALSKE 408
           DFVREALRDLLALQEKLVTIDNIQKTVAEYYKIK+AD+LSKRRSRSVARPRQMAMAL+KE
Sbjct: 356 DFVREALRDLLALQEKLVTIDNIQKTVAEYYKIKIADLLSKRRSRSVARPRQMAMALAKE 415

Query: 409 LTNQSLPEIGDAFGGRDHTTVLHACRKIAQLREESHDIKEDYANLIRTLSS 459
           LTN SLPEIGDAFGGRDHTTVLHACRKI QLREESHDIKED++NLIRTLSS
Sbjct: 416 LTNHSLPEIGDAFGGRDHTTVLHACRKIEQLREESHDIKEDFSNLIRTLSS 466