Pairwise Alignments

Query, 185 a.a., DNA-directed RNA polymerase specialized sigma subunit, sigma24 from Dechlorosoma suillum PS

Subject, 213 a.a., hypothetical protein from Acinetobacter radioresistens SK82

 Score = 99.8 bits (247), Expect = 3e-26
 Identities = 59/175 (33%), Positives = 94/175 (53%), Gaps = 5/175 (2%)

Query: 5   RELSDFLAGVERRAFKQALFAVRDEEA-ALDLVQDAMMRLAEKYGDRPAEELPMLFQRIL 63
           + L  F+  V  RA      A   ++  A+DLVQ+A + L + Y D+  EE   LF  IL
Sbjct: 30  QRLKFFMQDVTGRALVMMESATHGQQGIAMDLVQEAFISLHKSYRDKSTEEWYPLFYTIL 89

Query: 64  QNAIRDYYRRSKVRSMWTTLLSSLTPGDDEDSDPLDTLEVEGKAGDSPEGSLEQSQVLAV 123
            N ++D+ R+   R+   +    ++   DE+    + +++  ++  +P   L+Q+     
Sbjct: 90  NNKLQDWRRKEARRAQPFSFFRKVSLDSDEE----EMMDIVDESSPNPSDFLDQAVTAEE 145

Query: 124 IEAEISRLPGRQREAFLMRYWEDMDVAETAAAMGCSEGSVKTHCSRATHTLAAAL 178
           I+A +S+LP RQ++AF++R WE  D   TA  M C+EGSVKTH  RA   L  AL
Sbjct: 146 IQAAVSKLPVRQQQAFMLRAWEGFDTQTTAEIMDCTEGSVKTHYHRAIQGLRTAL 200